{ "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///P/1", "nt2": "///T/16", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -84.570, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 53.650, "chi2": -73.565, "conf2": "--", "pucker2": "~C2'-endo", "lambda2": 54.520, "C1C1_dist": 10.423, "N1N9_dist": 8.691, "C6C8_dist": 9.558, "CNNC_torsion": 3.541, "hbonds_num": 3, "hbonds_desc": "O6(carbonyl)-N4(amino)[2.71],N1(imino)-N3[2.76],N2(amino)-O2(carbonyl)[2.68]", "interBase_angle": 26.532, "planarity": 0.308, "simple_Shear": -0.227, "simple_Stretch": -0.219, "simple_Buckle": -26.337, "simple_Propeller": -3.217, "bp_simpleParams": [ -0.227, -0.219, -0.567, -26.337, -3.217, -1.453 ], "bp_params": [ -0.223, -0.223, -0.567, -26.293, -3.556, -1.416 ], "frame": { "rmsd": null, "origin": [ 26.293, -21.618, 23.116 ], "x_axis": [ 0.883, 0.154, 0.444 ], "y_axis": [ 0.444, 0.035, -0.895 ], "z_axis": [ -0.153, 0.988, -0.037 ], "quaternion": [ 0.686, -0.686, -0.218, -0.106 ] } }, { "index": 2, "nt1": "///P/2", "nt2": "///T/15", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -113.248, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 53.034, "chi2": -128.680, "conf2": "anti", "pucker2": "pucker-CHK", "lambda2": 55.838, "C1C1_dist": 10.681, "N1N9_dist": 8.969, "C6C8_dist": 9.968, "CNNC_torsion": -16.177, "hbonds_num": 2, "hbonds_desc": "N6(amino)-O4(carbonyl)[3.35],N1-N3(imino)[3.05]", "interBase_angle": 12.026, "planarity": 0.218, "simple_Shear": -0.340, "simple_Stretch": -0.002, "simple_Buckle": -2.288, "simple_Propeller": -11.806, "bp_simpleParams": [ -0.340, -0.002, 0.676, -2.288, -11.806, 1.320 ], "bp_params": [ -0.339, -0.012, 0.676, -1.940, -11.869, 1.327 ], "frame": { "rmsd": null, "origin": [ 25.391, -19.357, 20.839 ], "x_axis": [ 0.989, 0.095, -0.112 ], "y_axis": [ -0.081, -0.280, -0.957 ], "z_axis": [ -0.122, 0.955, -0.269 ], "quaternion": [ 0.600, -0.797, -0.004, 0.073 ] } }, { "index": 3, "nt1": "///P/3", "nt2": "///T/14", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -117.156, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 52.845, "chi2": -116.008, "conf2": "anti", "pucker2": "~C2'-endo", "lambda2": 49.214, "C1C1_dist": 10.779, "N1N9_dist": 8.930, "C6C8_dist": 9.749, "CNNC_torsion": -14.652, "hbonds_num": 3, "hbonds_desc": "O2(carbonyl)-N2(amino)[2.94],N3-N1(imino)[2.92],N4(amino)-O6(carbonyl)[2.84]", "interBase_angle": 11.939, "planarity": 0.190, "simple_Shear": 0.447, "simple_Stretch": -0.265, "simple_Buckle": -7.313, "simple_Propeller": -9.437, "bp_simpleParams": [ 0.447, -0.265, 0.751, -7.313, -9.437, -5.141 ], "bp_params": [ 0.435, -0.284, 0.751, -7.710, -9.116, -5.146 ], "frame": { "rmsd": null, "origin": [ 25.343, -15.768, 20.748 ], "x_axis": [ 0.723, -0.141, -0.676 ], "y_axis": [ -0.684, -0.288, -0.671 ], "z_axis": [ -0.100, 0.947, -0.305 ], "quaternion": [ 0.532, -0.761, 0.271, 0.255 ] } }, { "index": 4, "nt1": "///P/4", "nt2": "///T/13", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -108.534, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 50.482, "chi2": -101.880, "conf2": "anti", "pucker2": "~C2'-endo", "lambda2": 54.554, "C1C1_dist": 10.647, "N1N9_dist": 8.856, "C6C8_dist": 9.742, "CNNC_torsion": -12.049, "hbonds_num": 3, "hbonds_desc": "O2(carbonyl)-N2(amino)[2.72],N3-N1(imino)[2.74],N4(amino)-O6(carbonyl)[2.73]", "interBase_angle": 15.049, "planarity": 0.203, "simple_Shear": -0.270, "simple_Stretch": -0.245, "simple_Buckle": -10.515, "simple_Propeller": -10.766, "bp_simpleParams": [ -0.270, -0.245, 0.333, -10.515, -10.766, -2.115 ], "bp_params": [ -0.263, -0.253, 0.333, -10.219, -11.048, -2.116 ], "frame": { "rmsd": null, "origin": [ 25.875, -12.641, 19.627 ], "x_axis": [ 0.229, -0.298, -0.926 ], "y_axis": [ -0.973, -0.080, -0.215 ], "z_axis": [ -0.009, 0.951, -0.309 ], "quaternion": [ -0.459, 0.636, -0.500, -0.368 ] } }, { "index": 5, "nt1": "///P/5", "nt2": "///T/12", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -108.068, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 56.998, "chi2": -89.744, "conf2": "anti", "pucker2": "~C2'-endo", "lambda2": 49.929, "C1C1_dist": 10.772, "N1N9_dist": 9.022, "C6C8_dist": 9.978, "CNNC_torsion": -11.813, "hbonds_num": 2, "hbonds_desc": "N6(amino)-O4(carbonyl)[3.19],N1-N3(imino)[2.97]", "interBase_angle": 20.287, "planarity": 0.267, "simple_Shear": 0.517, "simple_Stretch": 0.086, "simple_Buckle": -10.519, "simple_Propeller": -17.347, "bp_simpleParams": [ 0.517, 0.086, -0.102, -10.519, -17.347, 0.841 ], "bp_params": [ 0.521, 0.053, -0.102, -11.572, -16.662, 0.845 ], "frame": { "rmsd": null, "origin": [ 24.727, -9.038, 19.155 ], "x_axis": [ -0.445, -0.290, -0.847 ], "y_axis": [ -0.896, 0.137, 0.423 ], "z_axis": [ -0.006, 0.947, -0.321 ], "quaternion": [ 0.305, -0.430, 0.690, 0.497 ] } }, { "index": 6, "nt1": "///P/6", "nt2": "///T/11", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -88.408, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 62.069, "chi2": -95.023, "conf2": "anti", "pucker2": "~C2'-endo", "lambda2": 51.710, "C1C1_dist": 10.830, "N1N9_dist": 9.235, "C6C8_dist": 10.324, "CNNC_torsion": -16.835, "hbonds_num": 2, "hbonds_desc": "O2(carbonyl)-N2(amino)[3.14],N3-N1(imino)[3.44]", "interBase_angle": 21.772, "planarity": 0.268, "simple_Shear": 1.129, "simple_Stretch": 0.395, "simple_Buckle": 6.221, "simple_Propeller": -20.864, "bp_simpleParams": [ 1.129, 0.395, -0.051, 6.221, -20.864, 8.736 ], "bp_params": [ 1.164, 0.275, -0.051, 3.951, -21.410, 8.885 ], "frame": { "rmsd": null, "origin": [ 24.371, -6.355, 17.920 ], "x_axis": [ -0.851, -0.219, -0.478 ], "y_axis": [ -0.525, 0.313, 0.792 ], "z_axis": [ -0.024, 0.924, -0.381 ], "quaternion": [ 0.142, -0.233, 0.798, 0.538 ] } }, { "index": 7, "nt1": "///P/7", "nt2": "///T/10", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -132.381, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 53.481, "chi2": -103.640, "conf2": "anti", "pucker2": "~C2'-endo", "lambda2": 54.838, "C1C1_dist": 10.751, "N1N9_dist": 9.024, "C6C8_dist": 9.993, "CNNC_torsion": -10.203, "hbonds_num": 3, "hbonds_desc": "O6(carbonyl)-N4(amino)[3.15],N1(imino)-N3[3.01],N2(amino)-O2(carbonyl)[2.78]", "interBase_angle": 11.445, "planarity": 0.184, "simple_Shear": -0.249, "simple_Stretch": -0.016, "simple_Buckle": -7.622, "simple_Propeller": -8.538, "bp_simpleParams": [ -0.249, -0.016, 0.397, -7.622, -8.538, 1.874 ], "bp_params": [ -0.248, -0.021, 0.397, -7.472, -8.669, 1.876 ], "frame": { "rmsd": null, "origin": [ 24.172, -2.275, 18.571 ], "x_axis": [ -0.990, 0.016, 0.137 ], "y_axis": [ 0.137, 0.267, 0.954 ], "z_axis": [ -0.021, 0.963, -0.267 ], "quaternion": [ -0.050, 0.048, 0.794, 0.603 ] } }, { "index": 8, "nt1": "///P/8", "nt2": "///T/9", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -113.088, "conf1": "anti", "pucker1": "----", "lambda1": 61.200, "chi2": -123.144, "conf2": "anti", "pucker2": "~C2'-endo", "lambda2": 53.030, "C1C1_dist": 10.474, "N1N9_dist": 8.878, "C6C8_dist": 9.972, "CNNC_torsion": -9.113, "hbonds_num": 4, "hbonds_desc": "O6(carbonyl)-N4(amino)[3.19],N1(imino)-N3[2.88],N2(amino)-O2(carbonyl)[2.52],N2(amino)-N3[2.87]", "interBase_angle": 11.692, "planarity": 0.148, "simple_Shear": 0.603, "simple_Stretch": -0.018, "simple_Buckle": 0.847, "simple_Propeller": -11.661, "bp_simpleParams": [ 0.603, -0.018, 0.116, 0.847, -11.661, 7.268 ], "bp_params": [ 0.601, -0.057, 0.116, 0.079, -11.691, 7.306 ], "frame": { "rmsd": null, "origin": [ 23.028, 1.067, 18.373 ], "x_axis": [ -0.722, 0.086, 0.686 ], "y_axis": [ 0.678, 0.286, 0.677 ], "z_axis": [ -0.138, 0.954, -0.265 ], "quaternion": [ -0.273, 0.253, 0.754, 0.541 ] } }, { "index": 9, "nt1": "///P/9", "nt2": "///T/8", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -116.808, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 51.939, "chi2": -115.731, "conf2": "anti", "pucker2": "~C2'-endo", "lambda2": 53.159, "C1C1_dist": 10.852, "N1N9_dist": 9.062, "C6C8_dist": 9.967, "CNNC_torsion": -7.786, "hbonds_num": 3, "hbonds_desc": "O2(carbonyl)-N2(amino)[2.87],N3-N1(imino)[2.96],N4(amino)-O6(carbonyl)[2.97]", "interBase_angle": 11.026, "planarity": 0.133, "simple_Shear": 0.060, "simple_Stretch": -0.046, "simple_Buckle": 5.720, "simple_Propeller": -9.426, "bp_simpleParams": [ 0.060, -0.046, 0.075, 5.720, -9.426, -0.800 ], "bp_params": [ 0.060, -0.046, 0.075, 5.722, -9.425, -0.802 ], "frame": { "rmsd": null, "origin": [ 22.374, 3.893, 16.897 ], "x_axis": [ -0.324, 0.108, 0.940 ], "y_axis": [ 0.913, 0.294, 0.281 ], "z_axis": [ -0.246, 0.950, -0.194 ], "quaternion": [ -0.440, 0.379, 0.673, 0.457 ] } }, { "index": 10, "nt1": "///P/10", "nt2": "///T/7", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -105.889, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 57.658, "chi2": -156.452, "conf2": "anti", "pucker2": "~C3'-endo", "lambda2": 56.990, "C1C1_dist": 10.452, "N1N9_dist": 8.860, "C6C8_dist": 9.909, "CNNC_torsion": -8.650, "hbonds_num": 3, "hbonds_desc": "O2(carbonyl)-N2(amino)[2.61],N3-N1(imino)[3.00],N4(amino)-O6(carbonyl)[3.31]", "interBase_angle": 26.758, "planarity": 0.318, "simple_Shear": 0.342, "simple_Stretch": 0.109, "simple_Buckle": 23.539, "simple_Propeller": -12.725, "bp_simpleParams": [ 0.342, 0.109, -0.115, 23.539, -12.725, 7.014 ], "bp_params": [ 0.344, 0.103, -0.115, 23.368, -13.036, 6.916 ], "frame": { "rmsd": null, "origin": [ 21.611, 6.869, 17.715 ], "x_axis": [ 0.224, 0.107, 0.969 ], "y_axis": [ 0.931, 0.269, -0.245 ], "z_axis": [ -0.287, 0.957, -0.039 ], "quaternion": [ 0.603, -0.499, -0.521, -0.342 ] } }, { "index": 11, "nt1": "///P/11", "nt2": "///T/6", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -167.985, "conf1": "anti", "pucker1": "~C3'-endo", "lambda1": 57.536, "chi2": 176.785, "conf2": "anti", "pucker2": "~C3'-endo", "lambda2": 54.769, "C1C1_dist": 10.218, "N1N9_dist": 8.565, "C6C8_dist": 9.629, "CNNC_torsion": -12.897, "hbonds_num": 2, "hbonds_desc": "N6(amino)-O4(carbonyl)[3.00],N1-N3(imino)[2.61]", "interBase_angle": 14.727, "planarity": 0.176, "simple_Shear": 0.175, "simple_Stretch": -0.281, "simple_Buckle": 10.615, "simple_Propeller": -10.207, "bp_simpleParams": [ 0.175, -0.281, 0.442, 10.615, -10.207, 5.004 ], "bp_params": [ 0.170, -0.284, 0.442, 10.426, -10.400, 5.004 ], "frame": { "rmsd": null, "origin": [ 19.824, 10.376, 17.893 ], "x_axis": [ 0.715, 0.235, 0.659 ], "y_axis": [ 0.686, -0.053, -0.725 ], "z_axis": [ -0.135, 0.971, -0.199 ], "quaternion": [ 0.605, -0.701, -0.328, -0.187 ] } }, { "index": 12, "nt1": "///P/12", "nt2": "///T/5", "bp": "C-g", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "intra_chain": false, "chi1": -125.208, "conf1": "anti", "pucker1": "~C2'-endo", "lambda1": 52.164, "chi2": -170.691, "conf2": "anti", "pucker2": "~C3'-endo", "lambda2": 54.525, "C1C1_dist": 10.766, "N1N9_dist": 8.965, "C6C8_dist": 9.806, "CNNC_torsion": 0.587, "hbonds_num": 3, "hbonds_desc": "O2(carbonyl)-N2(amino)[2.65],N3-N1(imino)[2.58],N4(amino)-O6(carbonyl)[2.72]", "interBase_angle": 8.756, "planarity": 0.104, "simple_Shear": 0.210, "simple_Stretch": -0.294, "simple_Buckle": 8.644, "simple_Propeller": -1.396, "bp_simpleParams": [ 0.210, -0.294, -0.185, 8.644, -1.396, -3.801 ], "bp_params": [ 0.206, -0.297, -0.185, 8.626, -1.503, -3.790 ], "frame": { "rmsd": null, "origin": [ 17.125, 13.610, 17.985 ], "x_axis": [ 0.980, 0.106, 0.168 ], "y_axis": [ 0.182, -0.143, -0.973 ], "z_axis": [ -0.079, 0.984, -0.160 ], "quaternion": [ 0.647, -0.756, -0.096, -0.029 ] } } ], "num_helices": 1, "helices": [ { "index": 1, "num_stems": 1, "strand1": "GACCACGGCCAC", "strand2": "CTGGTGCCGGTg", "bp_type": "||||||||||||", "helix_form": ".BBBB.BBB..", "helical_rise": 3.440, "helical_rise_std": 0.465, "helical_radius": 9.398, "helical_radius_std": 1.489, "helical_axis": [ -0.129, 0.966, -0.225 ], "point1": [ 26.289, -22.501, 24.084 ], "point2": [ 21.403, 14.183, 15.538 ], "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///P/1", "nt2": "///T/16", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ -0.223, -0.223, -0.567, -26.293, -3.556, -1.416 ], "step_params": [ -0.890, 1.758, 2.688, -13.545, -0.800, 33.295 ], "heli_params": [ 2.954, -0.245, 2.788, -1.330, 22.513, 35.881 ], "bp2_params": [ -0.339, -0.012, 0.676, -1.940, -11.869, 1.327 ], "groove_widths": [ null, null, null, null ], "simple_Rise": 2.688, "simple_Twist": 33.869, "simple_hRise": 2.789, "simple_hTwist": 36.412 }, { "index": 2, "nt1": "///P/2", "nt2": "///T/15", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ -0.339, -0.012, 0.676, -1.940, -11.869, 1.327 ], "step_params": [ -0.080, -1.003, 3.447, -1.376, 1.999, 38.939 ], "heli_params": [ -1.754, -0.053, 3.394, 2.995, 2.062, 39.012 ], "bp2_params": [ 0.435, -0.284, 0.751, -7.710, -9.116, -5.146 ], "groove_widths": [ null, null, null, null ], "simple_Rise": 3.447, "simple_Twist": 34.700, "simple_hRise": 3.386, "simple_hTwist": 34.783 }, { "index": 3, "nt1": "///P/3", "nt2": "///T/14", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.435, -0.284, 0.751, -7.710, -9.116, -5.146 ], "step_params": [ 0.447, -0.565, 3.286, 4.413, 2.723, 33.352 ], "heli_params": [ -1.418, -0.049, 3.261, 4.709, -7.632, 33.741 ], "bp2_params": [ -0.263, -0.253, 0.333, -10.219, -11.048, -2.116 ], "groove_widths": [ 12.262, null, 17.304, null ], "simple_Rise": 3.286, "simple_Twist": 36.968, "simple_hRise": 3.267, "simple_hTwist": 37.318 }, { "index": 4, "nt1": "///P/4", "nt2": "///T/13", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ -0.263, -0.253, 0.333, -10.219, -11.048, -2.116 ], "step_params": [ -0.554, 1.190, 3.578, 0.255, 0.729, 39.678 ], "heli_params": [ 1.660, 0.848, 3.595, 1.074, -0.376, 39.685 ], "bp2_params": [ 0.521, 0.053, -0.102, -11.572, -16.662, 0.845 ], "groove_widths": [ 12.524, 12.514, 17.471, 17.417 ], "simple_Rise": 3.578, "simple_Twist": 35.389, "simple_hRise": 3.597, "simple_hTwist": 35.397 }, { "index": 5, "nt1": "///P/5", "nt2": "///T/12", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.521, 0.053, -0.102, -11.572, -16.662, 0.845 ], "step_params": [ 0.368, 0.087, 2.951, 1.761, 3.383, 31.979 ], "heli_params": [ -0.391, -0.378, 2.960, 6.112, -3.183, 32.200 ], "bp2_params": [ 1.164, 0.275, -0.051, 3.951, -21.410, 8.885 ], "groove_widths": [ 12.747, 12.708, 15.891, 15.825 ], "simple_Rise": 2.951, "simple_Twist": 29.201, "simple_hRise": 2.958, "simple_hTwist": 29.444 }, { "index": 6, "nt1": "///P/6", "nt2": "///T/11", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 1.164, 0.275, -0.051, 3.951, -21.410, 8.885 ], "step_params": [ -0.286, 1.924, 3.650, -6.752, -1.549, 39.355 ], "heli_params": [ 3.015, -0.446, 3.574, -2.279, 9.932, 39.936 ], "bp2_params": [ -0.248, -0.021, 0.397, -7.472, -8.669, 1.876 ], "groove_widths": [ 13.360, 13.214, 16.370, 16.346 ], "simple_Rise": 3.650, "simple_Twist": 46.501, "simple_hRise": 3.593, "simple_hTwist": 46.986 }, { "index": 7, "nt1": "///P/7", "nt2": "///T/10", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ -0.248, -0.021, 0.397, -7.472, -8.669, 1.876 ], "step_params": [ 1.096, 0.255, 3.354, 2.919, 6.025, 35.344 ], "heli_params": [ -0.485, -1.340, 3.427, 9.815, -4.755, 35.952 ], "bp2_params": [ 0.601, -0.057, 0.116, 0.079, -11.691, 7.306 ], "groove_widths": [ 14.637, 14.423, 15.763, 15.356 ], "simple_Rise": 3.354, "simple_Twist": 31.006, "simple_hRise": 3.428, "simple_hTwist": 31.703 }, { "index": 8, "nt1": "///P/8", "nt2": "///T/9", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.601, -0.057, 0.116, 0.079, -11.691, 7.306 ], "step_params": [ -0.620, -0.463, 3.161, 3.137, 6.738, 26.490 ], "heli_params": [ -2.529, 2.028, 2.867, 14.349, -6.681, 27.495 ], "bp2_params": [ 0.060, -0.046, 0.075, 5.722, -9.425, -0.802 ], "groove_widths": [ 15.278, 15.063, 16.071, 15.697 ], "simple_Rise": 3.161, "simple_Twist": 29.428, "simple_hRise": 2.906, "simple_hTwist": 30.332 }, { "index": 9, "nt1": "///P/9", "nt2": "///T/8", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.060, -0.046, 0.075, 5.722, -9.425, -0.802 ], "step_params": [ 1.170, 0.090, 2.955, 1.945, 8.972, 30.619 ], "heli_params": [ -1.334, -1.802, 2.930, 16.529, -3.583, 31.934 ], "bp2_params": [ 0.344, 0.103, -0.115, 23.368, -13.036, 6.916 ], "groove_widths": [ 14.407, null, 19.713, null ], "simple_Rise": 2.955, "simple_Twist": 29.670, "simple_hRise": 2.926, "simple_hTwist": 31.027 }, { "index": 10, "nt1": "///P/10", "nt2": "///T/7", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.344, 0.103, -0.115, 23.368, -13.036, 6.916 ], "step_params": [ 0.027, -1.180, 3.759, -12.203, -3.437, 34.599 ], "heli_params": [ -1.323, -1.985, 3.641, -5.554, 19.717, 36.781 ], "bp2_params": [ 0.170, -0.284, 0.442, 10.426, -10.400, 5.004 ], "groove_widths": [ null, null, null, null ], "simple_Rise": 3.759, "simple_Twist": 35.045, "simple_hRise": 3.645, "simple_hTwist": 37.200 }, { "index": 11, "nt1": "///P/11", "nt2": "///T/6", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.170, -0.284, 0.442, 10.426, -10.400, 5.004 ], "step_params": [ -1.777, -1.671, 3.435, 0.621, 3.937, 33.046 ], "heli_params": [ -3.586, 3.208, 3.187, 6.890, -1.087, 33.279 ], "bp2_params": [ 0.206, -0.297, -0.185, 8.626, -1.503, -3.790 ], "groove_widths": [ null, null, null, null ], "simple_Rise": 3.435, "simple_Twist": 32.347, "simple_hRise": 3.181, "simple_hTwist": 32.585 }, { "index": 12, "nt1": "///P/12", "nt2": "///T/5", "bp": "C-g", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] } ], "num_stems": 1, "stems": [ { "index": 1, "helix_index": 1, "strand1": "GACCACGGCCAC", "strand2": "CTGGTGCCGGTg", "bp_type": "||||||||||||", "helix_form": ".BBBB.BBB..", "helical_rise": 3.440, "helical_rise_std": 0.465, "helical_radius": 9.398, "helical_radius_std": 1.489, "helical_axis": [ -0.129, 0.966, -0.225 ], "point1": [ 26.289, -22.501, 24.084 ], "point2": [ 21.403, 14.183, 15.538 ], "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///P/1", "nt2": "///T/16", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ -0.223, -0.223, -0.567, -26.293, -3.556, -1.416 ], "step_params": [ -0.890, 1.758, 2.688, -13.545, -0.800, 33.295 ], "heli_params": [ 2.954, -0.245, 2.788, -1.330, 22.513, 35.881 ], "bp2_params": [ -0.339, -0.012, 0.676, -1.940, -11.869, 1.327 ], "groove_widths": [ null, null, null, null ], "simple_Rise": 2.688, "simple_Twist": 33.869, "simple_hRise": 2.789, "simple_hTwist": 36.412 }, { "index": 2, "nt1": "///P/2", "nt2": "///T/15", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ -0.339, -0.012, 0.676, -1.940, -11.869, 1.327 ], "step_params": [ -0.080, -1.003, 3.447, -1.376, 1.999, 38.939 ], "heli_params": [ -1.754, -0.053, 3.394, 2.995, 2.062, 39.012 ], "bp2_params": [ 0.435, -0.284, 0.751, -7.710, -9.116, -5.146 ], "groove_widths": [ null, null, null, null ], "simple_Rise": 3.447, "simple_Twist": 34.700, "simple_hRise": 3.386, "simple_hTwist": 34.783 }, { "index": 3, "nt1": "///P/3", "nt2": "///T/14", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.435, -0.284, 0.751, -7.710, -9.116, -5.146 ], "step_params": [ 0.447, -0.565, 3.286, 4.413, 2.723, 33.352 ], "heli_params": [ -1.418, -0.049, 3.261, 4.709, -7.632, 33.741 ], "bp2_params": [ -0.263, -0.253, 0.333, -10.219, -11.048, -2.116 ], "groove_widths": [ 12.262, null, 17.304, null ], "simple_Rise": 3.286, "simple_Twist": 36.968, "simple_hRise": 3.267, "simple_hTwist": 37.318 }, { "index": 4, "nt1": "///P/4", "nt2": "///T/13", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ -0.263, -0.253, 0.333, -10.219, -11.048, -2.116 ], "step_params": [ -0.554, 1.190, 3.578, 0.255, 0.729, 39.678 ], "heli_params": [ 1.660, 0.848, 3.595, 1.074, -0.376, 39.685 ], "bp2_params": [ 0.521, 0.053, -0.102, -11.572, -16.662, 0.845 ], "groove_widths": [ 12.524, 12.514, 17.471, 17.417 ], "simple_Rise": 3.578, "simple_Twist": 35.389, "simple_hRise": 3.597, "simple_hTwist": 35.397 }, { "index": 5, "nt1": "///P/5", "nt2": "///T/12", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.521, 0.053, -0.102, -11.572, -16.662, 0.845 ], "step_params": [ 0.368, 0.087, 2.951, 1.761, 3.383, 31.979 ], "heli_params": [ -0.391, -0.378, 2.960, 6.112, -3.183, 32.200 ], "bp2_params": [ 1.164, 0.275, -0.051, 3.951, -21.410, 8.885 ], "groove_widths": [ 12.747, 12.708, 15.891, 15.825 ], "simple_Rise": 2.951, "simple_Twist": 29.201, "simple_hRise": 2.958, "simple_hTwist": 29.444 }, { "index": 6, "nt1": "///P/6", "nt2": "///T/11", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 1.164, 0.275, -0.051, 3.951, -21.410, 8.885 ], "step_params": [ -0.286, 1.924, 3.650, -6.752, -1.549, 39.355 ], "heli_params": [ 3.015, -0.446, 3.574, -2.279, 9.932, 39.936 ], "bp2_params": [ -0.248, -0.021, 0.397, -7.472, -8.669, 1.876 ], "groove_widths": [ 13.360, 13.214, 16.370, 16.346 ], "simple_Rise": 3.650, "simple_Twist": 46.501, "simple_hRise": 3.593, "simple_hTwist": 46.986 }, { "index": 7, "nt1": "///P/7", "nt2": "///T/10", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ -0.248, -0.021, 0.397, -7.472, -8.669, 1.876 ], "step_params": [ 1.096, 0.255, 3.354, 2.919, 6.025, 35.344 ], "heli_params": [ -0.485, -1.340, 3.427, 9.815, -4.755, 35.952 ], "bp2_params": [ 0.601, -0.057, 0.116, 0.079, -11.691, 7.306 ], "groove_widths": [ 14.637, 14.423, 15.763, 15.356 ], "simple_Rise": 3.354, "simple_Twist": 31.006, "simple_hRise": 3.428, "simple_hTwist": 31.703 }, { "index": 8, "nt1": "///P/8", "nt2": "///T/9", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.601, -0.057, 0.116, 0.079, -11.691, 7.306 ], "step_params": [ -0.620, -0.463, 3.161, 3.137, 6.738, 26.490 ], "heli_params": [ -2.529, 2.028, 2.867, 14.349, -6.681, 27.495 ], "bp2_params": [ 0.060, -0.046, 0.075, 5.722, -9.425, -0.802 ], "groove_widths": [ 15.278, 15.063, 16.071, 15.697 ], "simple_Rise": 3.161, "simple_Twist": 29.428, "simple_hRise": 2.906, "simple_hTwist": 30.332 }, { "index": 9, "nt1": "///P/9", "nt2": "///T/8", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.060, -0.046, 0.075, 5.722, -9.425, -0.802 ], "step_params": [ 1.170, 0.090, 2.955, 1.945, 8.972, 30.619 ], "heli_params": [ -1.334, -1.802, 2.930, 16.529, -3.583, 31.934 ], "bp2_params": [ 0.344, 0.103, -0.115, 23.368, -13.036, 6.916 ], "groove_widths": [ 14.407, null, 19.713, null ], "simple_Rise": 2.955, "simple_Twist": 29.670, "simple_hRise": 2.926, "simple_hTwist": 31.027 }, { "index": 10, "nt1": "///P/10", "nt2": "///T/7", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.344, 0.103, -0.115, 23.368, -13.036, 6.916 ], "step_params": [ 0.027, -1.180, 3.759, -12.203, -3.437, 34.599 ], "heli_params": [ -1.323, -1.985, 3.641, -5.554, 19.717, 36.781 ], "bp2_params": [ 0.170, -0.284, 0.442, 10.426, -10.400, 5.004 ], "groove_widths": [ null, null, null, null ], "simple_Rise": 3.759, "simple_Twist": 35.045, "simple_hRise": 3.645, "simple_hTwist": 37.200 }, { "index": 11, "nt1": "///P/11", "nt2": "///T/6", "bp": "A-T", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W", "bp1_params": [ 0.170, -0.284, 0.442, 10.426, -10.400, 5.004 ], "step_params": [ -1.777, -1.671, 3.435, 0.621, 3.937, 33.046 ], "heli_params": [ -3.586, 3.208, 3.187, 6.890, -1.087, 33.279 ], "bp2_params": [ 0.206, -0.297, -0.185, 8.626, -1.503, -3.790 ], "groove_widths": [ null, null, null, null ], "simple_Rise": 3.435, "simple_Twist": 32.347, "simple_hRise": 3.181, "simple_hTwist": 32.585 }, { "index": 12, "nt1": "///P/12", "nt2": "///T/5", "bp": "C-g", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] } ], "num_stacks": 2, "stacks": [ { "index": 1, "num_nts": 3, "nts_short": "Cug", "nts_long": "///T/3,///T/4,///T/5" }, { "index": 2, "num_nts": 4, "nts_short": "CAAA", "nts_long": "///P/12,///P/13,///T/2,///T/1" } ], "num_ssSegments": 2, "ssSegments": [ { "index": 1, "num_nts": 1, "nts_short": "A", "nts_long": "///P/13" }, { "index": 2, "num_nts": 4, "nts_short": "AACu", "nts_long": "///T/1,///T/2,///T/3,///T/4" } ], "dbn": { "all_chains": { "num_nts": 29, "num_chars": 30, "bseq": "GACCACGGCCACA&AACugTGGCCGTGGTC", "bseqUP": "GACCACGGCCACA&AACUGTGGCCGTGGTC", "sstr": "((((((((((((.&....))))))))))))", "form": "...BB.BBBB..-&B....A..B.BBB..-" }, "chain_P": { "num_nts": 13, "num_chars": 13, "bseq": "GACCACGGCCACA", "bseqUP": "GACCACGGCCACA", "sstr": "((((((((((((.", "form": "...BB.BBBB..-" }, "chain_T": { "num_nts": 16, "num_chars": 16, "bseq": "AACugTGGCCGTGGTC", "bseqUP": "AACUGTGGCCGTGGTC", "sstr": "....))))))))))))", "form": "B....A..B.BBB..-" } }, "chains": { "chain_P": { "num_nts": 13, "bseq": "GACCACGGCCACA", "sstr": "((((((((((((.", "form": "...BB.BBBB..-", "helical_rise": 3.491, "helical_rise_std": 0.525, "helical_axis": [ -0.158, 0.963, -0.220 ], "point1": [ 26.546, -22.213, 22.656 ], "point2": [ 19.879, 18.284, 13.408 ], "num_chars": 37, "suite": "G4bA!!C!!C!!A!!C!!G!!G!!C!!C!!A1bC!!A" }, "chain_T": { "num_nts": 16, "bseq": "AACugTGGCCGTGGTC", "sstr": "....))))))))))))", "form": "B....A..B.BBB..-", "helical_rise": 3.187, "helical_rise_std": 0.768, "helical_axis": [ 0.033, -0.936, 0.351 ], "point1": [ 24.107, 23.839, 15.150 ], "point2": [ 25.695, -20.987, 31.951 ], "num_chars": 46, "suite": "A!!A6gC1au1ag1cT1aG1bG!!C!!C4bG!!T!!G!!G!!T!!C" } }, "num_nts": 29, "nts": [ { "index": 1, "index_chain": 1, "chain_name": "P", "nt_resnum": 1, "nt_name": "DG", "nt_code": "G", "nt_id": "///P/1", "linked_nts": [ null, "///P/2" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BII,canonical,non-pair-contact,helix-end,stem-end", "alpha": null, "beta": null, "gamma": -175.303, "delta": 147.063, "epsilon": -136.843, "zeta": 176.813, "epsilon_zeta": 46.344, "bb_type": "BII", "chi": -84.570, "glyco_bond": "anti", "C5prime_xyz": [ -2.918, 7.630, -2.578 ], "P_xyz": [ null, null, null ], "form": ".", "ssZp": 1.559, "Dp": 1.708, "splay_angle": 22.286, "splay_distance": 3.876, "splay_ratio": 0.210, "d22": null, "d64": null, "eta": null, "theta": null, "eta_prime": null, "theta_prime": null, "eta_base": null, "theta_base": null, "v0": -26.587, "v1": 41.473, "v2": -39.633, "v3": 25.467, "v4": 0.379, "amplitude": 42.021, "phase_angle": 160.593, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "inc", "cluster": "__", "suiteness": 0.000, "filter_rmsd": 0.003, "frame": { "rmsd": 0.003, "origin": [ 26.189, -21.919, 23.177 ], "x_axis": [ 0.873, 0.186, 0.450 ], "y_axis": [ 0.482, -0.188, -0.856 ], "z_axis": [ -0.075, 0.964, -0.253 ], "quaternion": [ 0.598, -0.761, -0.219, -0.123 ] } }, { "index": 2, "index_chain": 2, "chain_name": "P", "nt_resnum": 2, "nt_name": "DA", "nt_code": "A", "nt_id": "///P/2", "linked_nts": [ "///P/1", "///P/3" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem", "alpha": -56.386, "beta": 131.172, "gamma": 55.753, "delta": 141.447, "epsilon": 173.401, "zeta": -90.707, "epsilon_zeta": -95.892, "bb_type": "BI", "chi": -113.248, "glyco_bond": "anti", "C5prime_xyz": [ -2.048, 8.409, -1.578 ], "P_xyz": [ 0.570, 8.299, -1.666 ], "form": ".", "ssZp": 2.213, "Dp": 2.228, "splay_angle": 20.547, "splay_distance": 3.671, "splay_ratio": 0.188, "d22": null, "d64": null, "eta": 153.020, "theta": -110.637, "eta_prime": -170.169, "theta_prime": -151.469, "eta_base": -124.019, "theta_base": -115.371, "v0": -22.465, "v1": 35.275, "v2": -34.044, "v3": 21.995, "v4": 0.028, "amplitude": 35.973, "phase_angle": 161.149, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "4b", "suiteness": 0.258, "filter_rmsd": 0.037, "frame": { "rmsd": 0.003, "origin": [ 25.183, -19.048, 20.773 ], "x_axis": [ 0.970, 0.189, -0.151 ], "y_axis": [ -0.090, -0.298, -0.950 ], "z_axis": [ -0.225, 0.936, -0.272 ], "quaternion": [ 0.592, -0.797, -0.031, 0.118 ] } }, { "index": 3, "index_chain": 3, "chain_name": "P", "nt_resnum": 3, "nt_name": "DC", "nt_code": "C", "nt_id": "///P/3", "linked_nts": [ "///P/2", "///P/4" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem", "alpha": -61.875, "beta": -167.098, "gamma": 41.208, "delta": 128.573, "epsilon": 176.028, "zeta": -97.640, "epsilon_zeta": -86.332, "bb_type": "BI", "chi": -117.156, "glyco_bond": "anti", "C5prime_xyz": [ -2.302, 8.582, -1.625 ], "P_xyz": [ -0.365, 10.273, -1.165 ], "form": ".", "ssZp": 2.440, "Dp": 2.417, "splay_angle": 17.901, "splay_distance": 3.116, "splay_ratio": 0.160, "d22": 4.170, "d64": 3.947, "eta": 168.434, "theta": -153.210, "eta_prime": -170.543, "theta_prime": -159.345, "eta_base": -121.070, "theta_base": -118.145, "v0": -30.387, "v1": 35.449, "v2": -26.907, "v3": 10.099, "v4": 12.501, "amplitude": 34.865, "phase_angle": 140.511, "puckering": "C1'-exo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.064, "frame": { "rmsd": 0.003, "origin": [ 25.560, -15.402, 20.582 ], "x_axis": [ 0.740, -0.051, -0.670 ], "y_axis": [ -0.641, -0.354, -0.681 ], "z_axis": [ -0.203, 0.934, -0.294 ], "quaternion": [ 0.523, -0.773, 0.224, 0.282 ] } }, { "index": 4, "index_chain": 4, "chain_name": "P", "nt_resnum": 4, "nt_name": "DC", "nt_code": "C", "nt_id": "///P/4", "linked_nts": [ "///P/3", "///P/5" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,canonical,non-pair-contact,helix,stem", "alpha": -43.019, "beta": -175.773, "gamma": 32.968, "delta": 139.380, "epsilon": -160.584, "zeta": -140.759, "epsilon_zeta": -19.824, "bb_type": "--", "chi": -108.534, "glyco_bond": "anti", "C5prime_xyz": [ -2.234, 8.407, -1.828 ], "P_xyz": [ -0.194, 10.004, -1.491 ], "form": "B", "ssZp": 2.147, "Dp": 2.146, "splay_angle": 21.729, "splay_distance": 3.634, "splay_ratio": 0.197, "d22": null, "d64": null, "eta": 177.402, "theta": -167.465, "eta_prime": -163.351, "theta_prime": -168.304, "eta_base": -117.480, "theta_base": -117.092, "v0": -26.085, "v1": 37.537, "v2": -34.013, "v3": 19.752, "v4": 3.721, "amplitude": 37.363, "phase_angle": 155.552, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.064, "frame": { "rmsd": 0.003, "origin": [ 25.966, -12.433, 19.725 ], "x_axis": [ 0.241, -0.203, -0.949 ], "y_axis": [ -0.963, -0.169, -0.208 ], "z_axis": [ -0.118, 0.965, -0.236 ], "quaternion": [ -0.457, 0.641, -0.455, -0.416 ] } }, { "index": 5, "index_chain": 5, "chain_name": "P", "nt_resnum": 5, "nt_name": "DA", "nt_code": "A", "nt_id": "///P/5", "linked_nts": [ "///P/4", "///P/6" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem", "alpha": -44.426, "beta": 151.902, "gamma": 51.808, "delta": 141.789, "epsilon": -168.707, "zeta": -106.040, "epsilon_zeta": -62.667, "bb_type": "BI", "chi": -108.068, "glyco_bond": "anti", "C5prime_xyz": [ -1.916, 8.259, -1.787 ], "P_xyz": [ 0.681, 8.501, -1.763 ], "form": "B", "ssZp": 2.010, "Dp": 2.078, "splay_angle": 17.887, "splay_distance": 3.053, "splay_ratio": 0.156, "d22": null, "d64": null, "eta": 170.447, "theta": -121.052, "eta_prime": -160.785, "theta_prime": -145.159, "eta_base": -109.368, "theta_base": -101.880, "v0": -17.514, "v1": 31.116, "v2": -32.199, "v3": 22.819, "v4": -3.559, "amplitude": 33.000, "phase_angle": 167.344, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.004, "origin": [ 24.588, -9.158, 18.962 ], "x_axis": [ -0.454, -0.149, -0.878 ], "y_axis": [ -0.890, 0.041, 0.454 ], "z_axis": [ -0.032, 0.988, -0.151 ], "quaternion": [ 0.330, -0.405, 0.641, 0.562 ] } }, { "index": 6, "index_chain": 6, "chain_name": "P", "nt_resnum": 6, "nt_name": "DC", "nt_code": "C", "nt_id": "///P/6", "linked_nts": [ "///P/5", "///P/7" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BII,canonical,non-pair-contact,helix,stem", "alpha": -36.253, "beta": 169.695, "gamma": 26.939, "delta": 140.039, "epsilon": -115.808, "zeta": 160.370, "epsilon_zeta": 83.822, "bb_type": "BII", "chi": -88.408, "glyco_bond": "anti", "C5prime_xyz": [ -2.901, 7.814, -2.521 ], "P_xyz": [ -0.872, 9.370, -3.081 ], "form": ".", "ssZp": 1.205, "Dp": 1.427, "splay_angle": 25.293, "splay_distance": 4.461, "splay_ratio": 0.235, "d22": null, "d64": null, "eta": -174.580, "theta": -173.905, "eta_prime": -153.165, "theta_prime": -177.838, "eta_base": -106.480, "theta_base": -129.533, "v0": -29.523, "v1": 40.800, "v2": -35.947, "v3": 19.901, "v4": 5.761, "amplitude": 40.317, "phase_angle": 153.077, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.003, "origin": [ 23.805, -6.462, 17.760 ], "x_axis": [ -0.877, -0.017, -0.481 ], "y_axis": [ -0.456, 0.348, 0.819 ], "z_axis": [ 0.153, 0.937, -0.313 ], "quaternion": [ 0.199, -0.149, 0.796, 0.551 ] } }, { "index": 7, "index_chain": 7, "chain_name": "P", "nt_resnum": 7, "nt_name": "DG", "nt_code": "G", "nt_id": "///P/7", "linked_nts": [ "///P/6", "///P/8" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem", "alpha": 100.943, "beta": -124.327, "gamma": 174.840, "delta": 144.208, "epsilon": -150.838, "zeta": -82.258, "epsilon_zeta": -68.580, "bb_type": "BI", "chi": -132.381, "glyco_bond": "anti", "C5prime_xyz": [ -1.463, 8.647, -0.470 ], "P_xyz": [ 0.683, 8.384, -1.936 ], "form": "B", "ssZp": 2.003, "Dp": 1.992, "splay_angle": 19.878, "splay_distance": 3.563, "splay_ratio": 0.175, "d22": null, "d64": null, "eta": 164.471, "theta": -107.564, "eta_prime": -166.684, "theta_prime": -140.212, "eta_base": -121.390, "theta_base": -91.310, "v0": -14.328, "v1": 29.435, "v2": -32.638, "v3": 25.133, "v4": -7.014, "amplitude": 32.855, "phase_angle": 173.404, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.006, "frame": { "rmsd": 0.006, "origin": [ 24.289, -2.089, 18.491 ], "x_axis": [ -0.986, 0.093, 0.135 ], "y_axis": [ 0.151, 0.203, 0.967 ], "z_axis": [ 0.062, 0.975, -0.214 ], "quaternion": [ -0.023, 0.079, 0.775, 0.626 ] } }, { "index": 8, "index_chain": 8, "chain_name": "P", "nt_resnum": 8, "nt_name": "DG", "nt_code": "G", "nt_id": "///P/8", "linked_nts": [ "///P/7", "///P/9" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,BI,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -52.256, "beta": 159.393, "gamma": 31.165, "delta": 99.730, "epsilon": 178.599, "zeta": -96.572, "epsilon_zeta": -84.829, "bb_type": "BI", "chi": -113.088, "glyco_bond": "anti", "C5prime_xyz": [ -3.188, 8.252, -2.101 ], "P_xyz": [ -1.384, 9.988, -2.847 ], "form": "B", "ssZp": 2.563, "Dp": 2.931, "splay_angle": 18.772, "splay_distance": 3.260, "splay_ratio": 0.163, "d22": null, "d64": null, "eta": 148.401, "theta": -173.484, "eta_prime": -176.364, "theta_prime": -176.027, "eta_base": -116.769, "theta_base": -156.276, "v0": -37.664, "v1": 23.801, "v2": -2.452, "v3": -18.960, "v4": 35.717, "amplitude": 37.816, "phase_angle": 93.718, "puckering": "O4'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.003, "frame": { "rmsd": 0.003, "origin": [ 22.784, 1.140, 18.544 ], "x_axis": [ -0.688, 0.201, 0.698 ], "y_axis": [ 0.723, 0.274, 0.634 ], "z_axis": [ -0.064, 0.940, -0.334 ], "quaternion": [ -0.251, 0.305, 0.758, 0.519 ] } }, { "index": 9, "index_chain": 9, "chain_name": "P", "nt_resnum": 9, "nt_name": "DC", "nt_code": "C", "nt_id": "///P/9", "linked_nts": [ "///P/8", "///P/10" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -57.167, "beta": 171.740, "gamma": 52.779, "delta": 111.246, "epsilon": -170.537, "zeta": -86.764, "epsilon_zeta": -83.773, "bb_type": "BI", "chi": -116.808, "glyco_bond": "anti", "C5prime_xyz": [ -2.539, 8.504, -1.876 ], "P_xyz": [ -0.290, 9.747, -2.390 ], "form": "B", "ssZp": 2.542, "Dp": 2.795, "splay_angle": 18.100, "splay_distance": 3.137, "splay_ratio": 0.157, "d22": 3.906, "d64": 3.260, "eta": 174.393, "theta": -144.754, "eta_prime": -174.288, "theta_prime": -148.358, "eta_base": -151.929, "theta_base": -101.653, "v0": -33.228, "v1": 26.676, "v2": -10.973, "v3": -7.652, "v4": 25.674, "amplitude": 32.218, "phase_angle": 109.912, "puckering": "C1'-exo", "sugar_class": "~C2'-endo", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.003, "origin": [ 22.334, 3.925, 16.911 ], "x_axis": [ -0.352, 0.182, 0.918 ], "y_axis": [ 0.898, 0.342, 0.276 ], "z_axis": [ -0.264, 0.922, -0.284 ], "quaternion": [ -0.420, 0.384, 0.703, 0.426 ] } }, { "index": 10, "index_chain": 10, "chain_name": "P", "nt_resnum": 10, "nt_name": "DC", "nt_code": "C", "nt_id": "///P/10", "linked_nts": [ "///P/9", "///P/11" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -57.628, "beta": 164.816, "gamma": 56.686, "delta": 126.117, "epsilon": -169.485, "zeta": -114.914, "epsilon_zeta": -54.571, "bb_type": "BI", "chi": -105.889, "glyco_bond": "anti", "C5prime_xyz": [ -2.943, 8.286, -2.087 ], "P_xyz": [ -0.775, 9.496, -2.877 ], "form": "B", "ssZp": 2.442, "Dp": 2.459, "splay_angle": 25.076, "splay_distance": 4.251, "splay_ratio": 0.217, "d22": null, "d64": null, "eta": 167.844, "theta": -158.995, "eta_prime": -160.809, "theta_prime": -177.358, "eta_base": -109.349, "theta_base": -132.026, "v0": -37.063, "v1": 40.102, "v2": -27.864, "v3": 7.414, "v4": 18.312, "amplitude": 39.939, "phase_angle": 134.241, "puckering": "C1'-exo", "sugar_class": "~C2'-endo", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.002, "origin": [ 21.714, 6.846, 17.871 ], "x_axis": [ 0.231, 0.238, 0.944 ], "y_axis": [ 0.839, 0.442, -0.317 ], "z_axis": [ -0.492, 0.865, -0.098 ], "quaternion": [ 0.627, -0.471, -0.572, -0.240 ] } }, { "index": 11, "index_chain": 11, "chain_name": "P", "nt_resnum": 11, "nt_name": "DA", "nt_code": "A", "nt_id": "///P/11", "linked_nts": [ "///P/10", "///P/12" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -72.366, "beta": 149.086, "gamma": 72.961, "delta": 87.807, "epsilon": -162.405, "zeta": -83.122, "epsilon_zeta": -79.283, "bb_type": "BI", "chi": -167.985, "glyco_bond": "anti", "C5prime_xyz": [ -2.236, 8.920, 0.615 ], "P_xyz": [ 0.205, 9.860, 0.455 ], "form": ".", "ssZp": 3.866, "Dp": 3.862, "splay_angle": 23.854, "splay_distance": 3.890, "splay_ratio": 0.207, "d22": null, "d64": null, "eta": 170.166, "theta": -159.367, "eta_prime": 177.582, "theta_prime": -155.706, "eta_base": -127.041, "theta_base": -141.872, "v0": -21.351, "v1": -0.528, "v2": 20.385, "v3": -33.294, "v4": 34.692, "amplitude": 35.330, "phase_angle": 54.761, "puckering": "C4'-exo", "sugar_class": "~C3'-endo", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.004, "origin": [ 19.758, 10.618, 18.008 ], "x_axis": [ 0.725, 0.323, 0.608 ], "y_axis": [ 0.637, 0.020, -0.770 ], "z_axis": [ -0.261, 0.946, -0.191 ], "quaternion": [ 0.623, -0.689, -0.349, -0.126 ] } }, { "index": 12, "index_chain": 12, "chain_name": "P", "nt_resnum": 12, "nt_name": "DC", "nt_code": "C", "nt_id": "///P/12", "linked_nts": [ "///P/11", "///P/13" ], "nt_type": "DNA", "dbn": "(", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix-end,stem-end,phosphate", "alpha": -76.039, "beta": -171.143, "gamma": 65.087, "delta": 145.430, "epsilon": -156.651, "zeta": -84.698, "epsilon_zeta": -71.953, "bb_type": "BI", "chi": -125.208, "glyco_bond": "anti", "C5prime_xyz": [ -1.833, 8.707, -0.943 ], "P_xyz": [ 0.536, 9.499, -0.127 ], "form": ".", "ssZp": 1.910, "Dp": 1.982, "splay_angle": 24.840, "splay_distance": 4.120, "splay_ratio": 0.215, "d22": null, "d64": null, "eta": 173.931, "theta": -100.791, "eta_prime": -159.559, "theta_prime": -114.637, "eta_base": -141.036, "theta_base": -56.744, "v0": -23.490, "v1": 38.279, "v2": -37.656, "v3": 25.136, "v4": -1.269, "amplitude": 39.370, "phase_angle": 163.031, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "32p", "cluster": "1b", "suiteness": 0.598, "filter_rmsd": 0.063, "frame": { "rmsd": 0.003, "origin": [ 17.206, 13.551, 18.162 ], "x_axis": [ 0.972, 0.121, 0.199 ], "y_axis": [ 0.208, -0.065, -0.976 ], "z_axis": [ -0.106, 0.990, -0.089 ], "quaternion": [ 0.674, -0.729, -0.113, -0.032 ] } }, { "index": 13, "index_chain": 13, "chain_name": "P", "nt_resnum": 13, "nt_name": "DA", "nt_code": "A", "nt_id": "///P/13", "linked_nts": [ "///P/12", null ], "nt_type": "DNA", "dbn": ".", "summary": "anti,~C2'-endo,non-pair-contact,ss-non-loop,phosphate", "alpha": -52.649, "beta": 177.826, "gamma": 22.626, "delta": 144.007, "epsilon": null, "zeta": null, "epsilon_zeta": null, "bb_type": "--", "chi": -76.528, "glyco_bond": "anti", "C5prime_xyz": [ -2.939, 7.227, -2.850 ], "P_xyz": [ -1.010, 8.789, -3.693 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": null, "theta": null, "eta_prime": null, "theta_prime": null, "eta_base": null, "theta_base": null, "v0": -22.897, "v1": 36.801, "v2": -35.974, "v3": 23.763, "v4": -0.821, "amplitude": 37.739, "phase_angle": 162.403, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.003, "origin": [ 19.426, 16.502, 16.334 ], "x_axis": [ 0.795, -0.028, -0.605 ], "y_axis": [ -0.595, 0.157, -0.789 ], "z_axis": [ 0.117, 0.987, 0.108 ], "quaternion": [ 0.718, -0.619, 0.252, 0.197 ] } }, { "index": 14, "index_chain": 1, "chain_name": "T", "nt_resnum": 1, "nt_name": "DA", "nt_code": "A", "nt_id": "///T/1", "linked_nts": [ null, "///T/2" ], "nt_type": "DNA", "dbn": ".", "summary": "anti,~C2'-endo,BI,non-pair-contact,ss-non-loop", "alpha": null, "beta": null, "gamma": 31.664, "delta": 145.574, "epsilon": -160.074, "zeta": -87.743, "epsilon_zeta": -72.331, "bb_type": "BI", "chi": -125.851, "glyco_bond": "anti", "C5prime_xyz": [ -1.833, 8.620, -0.880 ], "P_xyz": [ null, null, null ], "form": "B", "ssZp": 1.903, "Dp": 1.987, "splay_angle": 22.623, "splay_distance": 3.801, "splay_ratio": 0.197, "d22": null, "d64": null, "eta": null, "theta": null, "eta_prime": null, "theta_prime": null, "eta_base": null, "theta_base": null, "v0": -20.943, "v1": 36.080, "v2": -36.594, "v3": 25.543, "v4": -3.162, "amplitude": 37.733, "phase_angle": 165.887, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "inc", "cluster": "__", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.003, "origin": [ 16.533, 23.630, 15.690 ], "x_axis": [ -0.479, 0.019, -0.878 ], "y_axis": [ 0.877, 0.045, -0.478 ], "z_axis": [ 0.031, -0.999, -0.039 ], "quaternion": [ 0.363, 0.359, 0.625, -0.591 ] } }, { "index": 15, "index_chain": 2, "chain_name": "T", "nt_resnum": 2, "nt_name": "DA", "nt_code": "A", "nt_id": "///T/2", "linked_nts": [ "///T/1", "///T/3" ], "nt_type": "DNA", "dbn": ".", "summary": "anti,~C2'-endo,non-pair-contact,ss-non-loop", "alpha": -61.546, "beta": 174.128, "gamma": 36.519, "delta": 134.896, "epsilon": -129.418, "zeta": 72.785, "epsilon_zeta": 157.797, "bb_type": "--", "chi": -92.902, "glyco_bond": "anti", "C5prime_xyz": [ -2.841, 7.823, -2.471 ], "P_xyz": [ -0.771, 9.308, -3.070 ], "form": ".", "ssZp": 1.445, "Dp": 1.793, "splay_angle": 80.258, "splay_distance": 12.511, "splay_ratio": 0.646, "d22": null, "d64": null, "eta": 167.223, "theta": 78.881, "eta_prime": -159.877, "theta_prime": 75.190, "eta_base": -94.785, "theta_base": 86.444, "v0": -28.748, "v1": 37.462, "v2": -31.535, "v3": 15.903, "v4": 7.818, "amplitude": 36.758, "phase_angle": 149.083, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.003, "origin": [ 16.792, 20.682, 13.303 ], "x_axis": [ 0.327, 0.028, -0.945 ], "y_axis": [ 0.930, -0.186, 0.316 ], "z_axis": [ -0.167, -0.982, -0.087 ], "quaternion": [ 0.513, 0.632, 0.379, -0.439 ] } }, { "index": 16, "index_chain": 3, "chain_name": "T", "nt_resnum": 3, "nt_name": "DC", "nt_code": "C", "nt_id": "///T/3", "linked_nts": [ "///T/2", "///T/4" ], "nt_type": "DNA", "dbn": ".", "summary": "turn,anti,~C3'-endo,BI,non-pair-contact,ss-non-loop,phosphate", "alpha": -179.268, "beta": -122.550, "gamma": 70.244, "delta": 84.110, "epsilon": -140.562, "zeta": -41.603, "epsilon_zeta": -98.959, "bb_type": "BI", "chi": -145.762, "glyco_bond": "anti", "C5prime_xyz": [ -1.417, 8.890, -0.356 ], "P_xyz": [ 1.081, 9.027, 0.420 ], "form": ".", "ssZp": 3.794, "Dp": 4.513, "splay_angle": 55.305, "splay_distance": 9.154, "splay_ratio": 0.464, "d22": 3.873, "d64": 5.280, "eta": 148.906, "theta": -99.650, "eta_prime": 146.373, "theta_prime": -92.552, "eta_base": 141.909, "theta_base": -62.223, "v0": -2.238, "v1": -21.199, "v2": 35.030, "v3": -37.312, "v4": 25.093, "amplitude": 37.767, "phase_angle": 21.948, "puckering": "C3'-endo", "sugar_class": "~C3'-endo", "bin": "23p", "cluster": "6g", "suiteness": 0.038, "filter_rmsd": 0.063, "frame": { "rmsd": 0.002, "origin": [ 19.142, 24.741, 24.902 ], "x_axis": [ -0.532, 0.041, -0.846 ], "y_axis": [ 0.514, -0.778, -0.362 ], "z_axis": [ -0.673, -0.627, 0.393 ], "quaternion": [ -0.144, -0.462, -0.301, 0.822 ] } }, { "index": 17, "index_chain": 4, "chain_name": "T", "nt_resnum": 4, "nt_name": "A6U", "nt_code": "u", "is_modified": true, "nt_id": "///T/4", "linked_nts": [ "///T/3", "///T/5" ], "nt_type": "RNA", "dbn": ".", "summary": "modified,non-pair-contact,ss-non-loop,phosphate", "alpha": -91.305, "beta": 157.702, "gamma": 65.411, "delta": 67.212, "epsilon": -116.202, "zeta": -90.247, "epsilon_zeta": -25.955, "bb_type": "--", "chi": null, "glyco_bond": "--", "C5prime_xyz": [ -1.502, 8.970, 2.104 ], "P_xyz": [ 1.062, 9.485, 2.334 ], "form": ".", "ssZp": 4.829, "Dp": 4.938, "splay_angle": 36.234, "splay_distance": 5.467, "splay_ratio": 0.311, "d22": null, "d64": null, "eta": 156.854, "theta": -142.019, "eta_prime": -168.924, "theta_prime": -130.225, "eta_base": -113.626, "theta_base": -81.075, "v0": null, "v1": null, "v2": 49.808, "v3": -54.451, "v4": null, "amplitude": null, "phase_angle": null, "puckering": "", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.115, "filter_rmsd": 0.132, "frame": { "rmsd": 0.107, "origin": [ 15.017, 18.316, 19.853 ], "x_axis": [ 0.645, -0.159, -0.747 ], "y_axis": [ 0.752, -0.041, 0.658 ], "z_axis": [ -0.135, -0.987, 0.093 ], "quaternion": [ 0.651, 0.631, 0.235, -0.349 ] } }, { "index": 18, "index_chain": 5, "chain_name": "T", "nt_resnum": 5, "nt_name": "A6G", "nt_code": "g", "is_modified": true, "nt_id": "///T/5", "linked_nts": [ "///T/4", "///T/6" ], "nt_type": "RNA", "dbn": ")", "summary": "modified,anti,~C3'-endo,BI,canonical,non-pair-contact,helix-end,stem-end", "alpha": -50.546, "beta": 160.650, "gamma": 39.654, "delta": 75.228, "epsilon": -148.975, "zeta": -79.356, "epsilon_zeta": -69.619, "bb_type": "BI", "chi": -170.691, "glyco_bond": "anti", "C5prime_xyz": [ -0.590, 8.820, 1.532 ], "P_xyz": [ 1.956, 8.417, 2.063 ], "form": ".", "ssZp": 4.601, "Dp": 4.728, "splay_angle": 28.941, "splay_distance": 4.538, "splay_ratio": 0.255, "d22": null, "d64": null, "eta": 170.050, "theta": -120.371, "eta_prime": -167.558, "theta_prime": -121.487, "eta_base": -105.521, "theta_base": -90.156, "v0": 2.985, "v1": -27.090, "v2": 50.182, "v3": -44.813, "v4": 20.150, "amplitude": 51.446, "phase_angle": 12.729, "puckering": "C3'-endo", "sugar_class": "~C3'-endo", "bin": "33p", "cluster": "1a", "suiteness": 0.146, "filter_rmsd": 0.124, "frame": { "rmsd": 0.124, "origin": [ 17.044, 13.668, 17.809 ], "x_axis": [ 0.987, 0.086, 0.139 ], "y_axis": [ -0.155, 0.220, 0.963 ], "z_axis": [ 0.052, -0.972, 0.230 ], "quaternion": [ 0.781, 0.620, -0.028, 0.077 ] } }, { "index": 19, "index_chain": 6, "chain_name": "T", "nt_resnum": 6, "nt_name": "DT", "nt_code": "T", "nt_id": "///T/6", "linked_nts": [ "///T/5", "///T/7" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C3'-endo,canonical,non-pair-contact,helix,stem", "alpha": 160.687, "beta": -151.004, "gamma": 172.042, "delta": 93.297, "epsilon": -129.779, "zeta": -87.514, "epsilon_zeta": -42.265, "bb_type": "--", "chi": 176.785, "glyco_bond": "anti", "C5prime_xyz": [ -1.142, 8.001, 1.962 ], "P_xyz": [ 0.984, 9.246, 1.103 ], "form": "A", "ssZp": 4.631, "Dp": 4.663, "splay_angle": 22.990, "splay_distance": 3.630, "splay_ratio": 0.202, "d22": null, "d64": null, "eta": 178.853, "theta": -153.163, "eta_prime": -157.076, "theta_prime": -149.173, "eta_base": -106.759, "theta_base": -125.889, "v0": 14.025, "v1": -30.268, "v2": 34.203, "v3": -26.915, "v4": 8.225, "amplitude": 34.332, "phase_angle": 355.030, "puckering": "C2'-exo", "sugar_class": "~C3'-endo", "bin": "33t", "cluster": "1c", "suiteness": 0.585, "filter_rmsd": 0.107, "frame": { "rmsd": 0.004, "origin": [ 19.891, 10.134, 17.778 ], "x_axis": [ 0.690, 0.152, 0.708 ], "y_axis": [ -0.724, 0.136, 0.677 ], "z_axis": [ 0.007, -0.979, 0.204 ], "quaternion": [ 0.712, 0.581, -0.246, 0.307 ] } }, { "index": 20, "index_chain": 7, "chain_name": "T", "nt_resnum": 7, "nt_name": "DG", "nt_code": "G", "nt_id": "///T/7", "linked_nts": [ "///T/6", "///T/8" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C3'-endo,BI,canonical,non-pair-contact,helix,stem", "alpha": -39.843, "beta": 153.461, "gamma": 50.472, "delta": 89.845, "epsilon": -164.666, "zeta": -81.227, "epsilon_zeta": -83.439, "bb_type": "BI", "chi": -156.452, "glyco_bond": "anti", "C5prime_xyz": [ -1.579, 8.874, 0.273 ], "P_xyz": [ 1.015, 9.217, 0.389 ], "form": ".", "ssZp": 4.013, "Dp": 4.132, "splay_angle": 20.085, "splay_distance": 3.235, "splay_ratio": 0.175, "d22": null, "d64": null, "eta": 174.043, "theta": -153.782, "eta_prime": -161.986, "theta_prime": -150.358, "eta_base": -123.967, "theta_base": -134.665, "v0": -6.193, "v1": -13.706, "v2": 26.895, "v3": -31.180, "v4": 23.776, "amplitude": 30.999, "phase_angle": 29.820, "puckering": "C3'-endo", "sugar_class": "~C3'-endo", "bin": "33p", "cluster": "1a", "suiteness": 0.234, "filter_rmsd": 0.003, "frame": { "rmsd": 0.003, "origin": [ 21.507, 6.892, 17.559 ], "x_axis": [ 0.185, -0.009, 0.983 ], "y_axis": [ -0.980, -0.068, 0.184 ], "z_axis": [ 0.065, -0.998, -0.022 ], "quaternion": [ 0.523, 0.565, -0.438, 0.464 ] } }, { "index": 21, "index_chain": 8, "chain_name": "T", "nt_resnum": 8, "nt_name": "DG", "nt_code": "G", "nt_id": "///T/8", "linked_nts": [ "///T/7", "///T/9" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem", "alpha": -53.023, "beta": -178.095, "gamma": 53.223, "delta": 142.400, "epsilon": -165.968, "zeta": -93.743, "epsilon_zeta": -72.226, "bb_type": "BI", "chi": -115.731, "glyco_bond": "anti", "C5prime_xyz": [ -1.628, 8.412, -1.377 ], "P_xyz": [ 0.835, 9.004, -0.759 ], "form": ".", "ssZp": 2.059, "Dp": 2.104, "splay_angle": 18.084, "splay_distance": 3.271, "splay_ratio": 0.161, "d22": null, "d64": null, "eta": 178.205, "theta": -117.593, "eta_prime": -153.298, "theta_prime": -137.142, "eta_base": -132.537, "theta_base": -102.626, "v0": -13.072, "v1": 27.230, "v2": -30.263, "v3": 23.403, "v4": -6.684, "amplitude": 30.445, "phase_angle": 173.741, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "32p", "cluster": "1b", "suiteness": 0.682, "filter_rmsd": 0.004, "frame": { "rmsd": 0.004, "origin": [ 22.414, 3.861, 16.883 ], "x_axis": [ -0.298, 0.031, 0.954 ], "y_axis": [ -0.927, -0.246, -0.282 ], "z_axis": [ 0.226, -0.969, 0.102 ], "quaternion": [ 0.373, 0.460, -0.488, 0.641 ] } }, { "index": 22, "index_chain": 9, "chain_name": "T", "nt_resnum": 9, "nt_name": "DC", "nt_code": "C", "nt_id": "///T/9", "linked_nts": [ "///T/8", "///T/10" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -54.187, "beta": 164.790, "gamma": 40.635, "delta": 113.248, "epsilon": -163.823, "zeta": -115.099, "epsilon_zeta": -48.724, "bb_type": "BI", "chi": -123.144, "glyco_bond": "anti", "C5prime_xyz": [ -2.830, 8.630, -1.599 ], "P_xyz": [ -0.858, 10.336, -1.729 ], "form": "B", "ssZp": 2.615, "Dp": 2.598, "splay_angle": 21.287, "splay_distance": 3.571, "splay_ratio": 0.187, "d22": 4.860, "d64": 3.893, "eta": 163.305, "theta": -169.409, "eta_prime": -172.920, "theta_prime": -165.334, "eta_base": -127.062, "theta_base": -131.672, "v0": -39.889, "v1": 34.896, "v2": -17.275, "v3": -5.150, "v4": 28.042, "amplitude": 39.107, "phase_angle": 116.216, "puckering": "C1'-exo", "sugar_class": "~C2'-endo", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.003, "origin": [ 23.273, 0.994, 18.201 ], "x_axis": [ -0.746, -0.029, 0.665 ], "y_axis": [ -0.632, -0.284, -0.721 ], "z_axis": [ 0.210, -0.958, 0.193 ], "quaternion": [ 0.202, 0.294, -0.563, 0.746 ] } }, { "index": 23, "index_chain": 10, "chain_name": "T", "nt_resnum": 10, "nt_name": "DC", "nt_code": "C", "nt_id": "///T/10", "linked_nts": [ "///T/9", "///T/11" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C2'-endo,BII,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -62.416, "beta": 170.684, "gamma": 55.023, "delta": 148.046, "epsilon": -125.018, "zeta": -162.261, "epsilon_zeta": 37.243, "bb_type": "BII", "chi": -103.640, "glyco_bond": "anti", "C5prime_xyz": [ -2.233, 8.289, -1.901 ], "P_xyz": [ 0.249, 9.082, -1.936 ], "form": ".", "ssZp": 1.405, "Dp": 1.439, "splay_angle": 22.314, "splay_distance": 3.928, "splay_ratio": 0.212, "d22": null, "d64": null, "eta": -177.270, "theta": -158.736, "eta_prime": -156.862, "theta_prime": -166.568, "eta_base": -125.805, "theta_base": -112.621, "v0": -23.255, "v1": 38.946, "v2": -38.903, "v3": 26.545, "v4": -2.314, "amplitude": 40.383, "phase_angle": 164.439, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.002, "origin": [ 24.055, -2.462, 18.651 ], "x_axis": [ -0.988, -0.061, 0.144 ], "y_axis": [ -0.116, -0.329, -0.937 ], "z_axis": [ 0.105, -0.942, 0.317 ], "quaternion": [ 0.017, 0.077, -0.579, 0.811 ] } }, { "index": 24, "index_chain": 11, "chain_name": "T", "nt_resnum": 11, "nt_name": "DG", "nt_code": "G", "nt_id": "///T/11", "linked_nts": [ "///T/10", "///T/12" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -53.979, "beta": 141.546, "gamma": 45.570, "delta": 141.376, "epsilon": 178.579, "zeta": -99.109, "epsilon_zeta": -82.311, "bb_type": "BI", "chi": -95.023, "glyco_bond": "anti", "C5prime_xyz": [ -2.211, 7.911, -2.357 ], "P_xyz": [ 0.388, 8.048, -2.594 ], "form": "B", "ssZp": 1.988, "Dp": 2.141, "splay_angle": 17.107, "splay_distance": 2.958, "splay_ratio": 0.150, "d22": null, "d64": null, "eta": 158.193, "theta": -122.413, "eta_prime": -167.626, "theta_prime": -153.751, "eta_base": -113.593, "theta_base": -125.182, "v0": -18.042, "v1": 31.494, "v2": -32.256, "v3": 22.712, "v4": -3.195, "amplitude": 33.157, "phase_angle": 166.611, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "4b", "suiteness": 0.194, "filter_rmsd": 0.004, "frame": { "rmsd": 0.004, "origin": [ 24.938, -6.247, 18.079 ], "x_axis": [ -0.787, -0.408, -0.462 ], "y_axis": [ 0.584, -0.251, -0.772 ], "z_axis": [ 0.199, -0.878, 0.436 ], "quaternion": [ -0.315, -0.084, -0.524, 0.787 ] } }, { "index": 25, "index_chain": 12, "chain_name": "T", "nt_resnum": 12, "nt_name": "DT", "nt_code": "T", "nt_id": "///T/12", "linked_nts": [ "///T/11", "///T/13" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C2'-endo,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -44.489, "beta": -173.046, "gamma": 25.281, "delta": 136.202, "epsilon": -163.118, "zeta": -132.645, "epsilon_zeta": -30.473, "bb_type": "--", "chi": -89.744, "glyco_bond": "anti", "C5prime_xyz": [ -2.728, 7.740, -2.563 ], "P_xyz": [ -0.901, 9.535, -3.060 ], "form": "B", "ssZp": 1.913, "Dp": 2.224, "splay_angle": 23.971, "splay_distance": 4.041, "splay_ratio": 0.211, "d22": null, "d64": null, "eta": 172.260, "theta": -162.760, "eta_prime": -171.028, "theta_prime": -162.495, "eta_base": -135.918, "theta_base": -112.211, "v0": -26.092, "v1": 35.780, "v2": -31.393, "v3": 17.204, "v4": 5.324, "amplitude": 35.346, "phase_angle": 152.641, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.106, "frame": { "rmsd": 0.002, "origin": [ 24.867, -8.917, 19.348 ], "x_axis": [ -0.439, -0.425, -0.792 ], "y_axis": [ 0.898, -0.227, -0.377 ], "z_axis": [ -0.019, -0.876, 0.481 ], "quaternion": [ -0.451, -0.277, -0.428, 0.733 ] } }, { "index": 26, "index_chain": 13, "chain_name": "T", "nt_resnum": 13, "nt_name": "DG", "nt_code": "G", "nt_id": "///T/13", "linked_nts": [ "///T/12", "///T/14" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C2'-endo,canonical,non-pair-contact,helix,stem,phosphate", "alpha": -35.850, "beta": 143.828, "gamma": 51.437, "delta": 140.063, "epsilon": -159.192, "zeta": -138.038, "epsilon_zeta": -21.154, "bb_type": "--", "chi": -101.880, "glyco_bond": "anti", "C5prime_xyz": [ -2.708, 8.185, -2.083 ], "P_xyz": [ -0.226, 8.820, -2.544 ], "form": "B", "ssZp": 2.129, "Dp": 2.147, "splay_angle": 21.589, "splay_distance": 3.625, "splay_ratio": 0.187, "d22": null, "d64": null, "eta": 172.373, "theta": -148.638, "eta_prime": -155.349, "theta_prime": -169.514, "eta_base": -106.653, "theta_base": -134.625, "v0": -30.199, "v1": 41.320, "v2": -36.118, "v3": 19.742, "v4": 6.233, "amplitude": 40.741, "phase_angle": 152.442, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.003, "frame": { "rmsd": 0.003, "origin": [ 25.783, -12.849, 19.530 ], "x_axis": [ 0.207, -0.389, -0.898 ], "y_axis": [ 0.973, -0.011, 0.229 ], "z_axis": [ -0.099, -0.921, 0.376 ], "quaternion": [ 0.627, 0.459, 0.319, -0.543 ] } }, { "index": 27, "index_chain": 14, "chain_name": "T", "nt_resnum": 14, "nt_name": "DG", "nt_code": "G", "nt_id": "///T/14", "linked_nts": [ "///T/13", "///T/15" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,~C2'-endo,BI,canonical,non-pair-contact,helix,stem", "alpha": -45.076, "beta": 156.101, "gamma": 41.718, "delta": 135.740, "epsilon": -175.216, "zeta": -97.020, "epsilon_zeta": -78.196, "bb_type": "BI", "chi": -116.008, "glyco_bond": "anti", "C5prime_xyz": [ -2.390, 8.545, -1.548 ], "P_xyz": [ -0.012, 9.616, -1.305 ], "form": ".", "ssZp": 2.353, "Dp": 2.354, "splay_angle": 20.611, "splay_distance": 3.564, "splay_ratio": 0.183, "d22": null, "d64": null, "eta": 165.318, "theta": -131.732, "eta_prime": -173.170, "theta_prime": -154.479, "eta_base": -132.586, "theta_base": -108.801, "v0": -29.426, "v1": 38.478, "v2": -32.441, "v3": 16.411, "v4": 7.885, "amplitude": 37.744, "phase_angle": 149.259, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.003, "frame": { "rmsd": 0.003, "origin": [ 25.126, -16.134, 20.914 ], "x_axis": [ 0.695, -0.227, -0.682 ], "y_axis": [ 0.719, 0.214, 0.661 ], "z_axis": [ -0.004, -0.950, 0.312 ], "quaternion": [ 0.745, 0.541, 0.228, -0.317 ] } }, { "index": 28, "index_chain": 15, "chain_name": "T", "nt_resnum": 15, "nt_name": "DT", "nt_code": "T", "nt_id": "///T/15", "linked_nts": [ "///T/14", "///T/16" ], "nt_type": "DNA", "dbn": ")", "summary": "anti,canonical,non-pair-contact,helix,stem", "alpha": -71.050, "beta": -174.048, "gamma": 33.625, "delta": 82.448, "epsilon": 67.954, "zeta": 78.154, "epsilon_zeta": -10.201, "bb_type": "--", "chi": -128.680, "glyco_bond": "anti", "C5prime_xyz": [ -1.885, 8.686, -1.370 ], "P_xyz": [ 0.372, 10.001, -1.479 ], "form": ".", "ssZp": 1.860, "Dp": 2.289, "splay_angle": 15.755, "splay_distance": 2.826, "splay_ratio": 0.152, "d22": 4.731, "d64": 3.158, "eta": -174.585, "theta": -144.429, "eta_prime": -165.986, "theta_prime": -136.734, "eta_base": -112.891, "theta_base": -85.633, "v0": -8.901, "v1": -14.069, "v2": 30.148, "v3": -36.278, "v4": 28.597, "amplitude": 35.851, "phase_angle": 32.761, "puckering": "C3'-endo", "sugar_class": "pucker-CHK", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.106, "frame": { "rmsd": 0.002, "origin": [ 25.600, -19.666, 20.906 ], "x_axis": [ 0.997, -0.002, -0.073 ], "y_axis": [ 0.071, 0.264, 0.962 ], "z_axis": [ 0.017, -0.965, 0.263 ], "quaternion": [ 0.794, 0.606, 0.028, -0.023 ] } }, { "index": 29, "index_chain": 16, "chain_name": "T", "nt_resnum": 16, "nt_name": "DC", "nt_code": "C", "nt_id": "///T/16", "linked_nts": [ "///T/15", null ], "nt_type": "DNA", "dbn": ")", "summary": "~C2'-endo,canonical,non-pair-contact,helix-end,stem-end", "alpha": -150.583, "beta": 165.335, "gamma": 65.525, "delta": 140.708, "epsilon": null, "zeta": null, "epsilon_zeta": null, "bb_type": "--", "chi": -73.565, "glyco_bond": "--", "C5prime_xyz": [ -3.171, 7.246, -2.888 ], "P_xyz": [ -1.007, 7.417, -4.344 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": null, "theta": null, "eta_prime": null, "theta_prime": null, "eta_base": null, "theta_base": null, "v0": -26.047, "v1": 38.081, "v2": -34.970, "v3": 20.807, "v4": 3.032, "amplitude": 38.075, "phase_angle": 156.699, "puckering": "C2'-endo", "sugar_class": "~C2'-endo", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.003, "origin": [ 26.398, -21.316, 23.055 ], "x_axis": [ 0.893, 0.126, 0.431 ], "y_axis": [ -0.390, -0.258, 0.884 ], "z_axis": [ 0.223, -0.958, -0.181 ], "quaternion": [ 0.603, 0.764, -0.086, 0.214 ] } } ], "num_hbonds": 855, "hbonds": [ { "index": 1, "atom1_serNum": 1, "atom2_serNum": 169, "donAcc_type": "standard", "distance": 2.890, "atom1_id": "///A/1/N", "atom2_id": "///A/21/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 2, "atom1_serNum": 4, "atom2_serNum": 166, "donAcc_type": "standard", "distance": 2.777, "atom1_id": "///A/1/O", "atom2_id": "///A/21/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 3, "atom1_serNum": 12, "atom2_serNum": 1077, "donAcc_type": "standard", "distance": 2.957, "atom1_id": "///A/2/O", "atom2_id": "///A/129/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 4, "atom1_serNum": 17, "atom2_serNum": 149, "donAcc_type": "standard", "distance": 2.753, "atom1_id": "///A/3/N", "atom2_id": "///A/19/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 5, "atom1_serNum": 25, "atom2_serNum": 149, "donAcc_type": "standard", "distance": 3.524, "atom1_id": "///A/4/N", "atom2_id": "///A/19/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 6, "atom1_serNum": 28, "atom2_serNum": 146, "donAcc_type": "standard", "distance": 2.996, "atom1_id": "///A/4/O", "atom2_id": "///A/19/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 7, "atom1_serNum": 32, "atom2_serNum": 33, "donAcc_type": "standard", "distance": 2.830, "atom1_id": "///A/4/OD2", "atom2_id": "///A/5/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 8, "atom1_serNum": 32, "atom2_serNum": 6827, "donAcc_type": "acceptable", "distance": 3.195, "atom1_id": "///A/4/OD2", "atom2_id": "///A/802/O2", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 9, "atom1_serNum": 36, "atom2_serNum": 6829, "donAcc_type": "acceptable", "distance": 3.045, "atom1_id": "///A/5/O", "atom2_id": "///A/802/O3", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 10, "atom1_serNum": 40, "atom2_serNum": 130, "donAcc_type": "standard", "distance": 3.133, "atom1_id": "///A/6/N", "atom2_id": "///A/17/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 11, "atom1_serNum": 43, "atom2_serNum": 127, "donAcc_type": "standard", "distance": 2.800, "atom1_id": "///A/6/O", "atom2_id": "///A/17/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 12, "atom1_serNum": 46, "atom2_serNum": 134, "donAcc_type": "standard", "distance": 3.048, "atom1_id": "///A/6/OD1", "atom2_id": "///A/17/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 13, "atom1_serNum": 47, "atom2_serNum": 137, "donAcc_type": "standard", "distance": 2.932, "atom1_id": "///A/6/OD2", "atom2_id": "///A/17/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 14, "atom1_serNum": 47, "atom2_serNum": 2086, "donAcc_type": "standard", "distance": 3.161, "atom1_id": "///A/6/OD2", "atom2_id": "///A/253/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 15, "atom1_serNum": 59, "atom2_serNum": 768, "donAcc_type": "acceptable", "distance": 3.142, "atom1_id": "///A/7/OH", "atom2_id": "///A/91/NE2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 16, "atom1_serNum": 60, "atom2_serNum": 115, "donAcc_type": "standard", "distance": 2.982, "atom1_id": "///A/8/N", "atom2_id": "///A/15/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 17, "atom1_serNum": 63, "atom2_serNum": 112, "donAcc_type": "standard", "distance": 2.797, "atom1_id": "///A/8/O", "atom2_id": "///A/15/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 18, "atom1_serNum": 73, "atom2_serNum": 752, "donAcc_type": "acceptable", "distance": 2.926, "atom1_id": "///A/9/OG1", "atom2_id": "///A/89/NE2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 19, "atom1_serNum": 75, "atom2_serNum": 99, "donAcc_type": "standard", "distance": 2.816, "atom1_id": "///A/10/N", "atom2_id": "///A/13/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 20, "atom1_serNum": 78, "atom2_serNum": 96, "donAcc_type": "standard", "distance": 2.948, "atom1_id": "///A/10/O", "atom2_id": "///A/13/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 21, "atom1_serNum": 82, "atom2_serNum": 271, "donAcc_type": "standard", "distance": 2.887, "atom1_id": "///A/10/OE1", "atom2_id": "///A/32/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 22, "atom1_serNum": 119, "atom2_serNum": 257, "donAcc_type": "standard", "distance": 2.859, "atom1_id": "///A/16/N", "atom2_id": "///A/31/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 23, "atom1_serNum": 122, "atom2_serNum": 254, "donAcc_type": "standard", "distance": 2.920, "atom1_id": "///A/16/O", "atom2_id": "///A/31/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 24, "atom1_serNum": 136, "atom2_serNum": 1944, "donAcc_type": "standard", "distance": 3.229, "atom1_id": "///A/17/NH1", "atom2_id": "///A/235/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 25, "atom1_serNum": 138, "atom2_serNum": 236, "donAcc_type": "standard", "distance": 2.836, "atom1_id": "///A/18/N", "atom2_id": "///A/29/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 26, "atom1_serNum": 141, "atom2_serNum": 233, "donAcc_type": "standard", "distance": 3.007, "atom1_id": "///A/18/O", "atom2_id": "///A/29/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 27, "atom1_serNum": 157, "atom2_serNum": 219, "donAcc_type": "standard", "distance": 2.855, "atom1_id": "///A/20/N", "atom2_id": "///A/27/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 28, "atom1_serNum": 160, "atom2_serNum": 216, "donAcc_type": "standard", "distance": 2.931, "atom1_id": "///A/20/O", "atom2_id": "///A/27/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 29, "atom1_serNum": 165, "atom2_serNum": 241, "donAcc_type": "standard", "distance": 2.473, "atom1_id": "///A/20/NZ", "atom2_id": "///A/29/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 30, "atom1_serNum": 174, "atom2_serNum": 1691, "donAcc_type": "standard", "distance": 3.181, "atom1_id": "///A/21/NZ", "atom2_id": "///A/204/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 31, "atom1_serNum": 175, "atom2_serNum": 199, "donAcc_type": "standard", "distance": 3.040, "atom1_id": "///A/22/N", "atom2_id": "///A/25/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 32, "atom1_serNum": 178, "atom2_serNum": 196, "donAcc_type": "standard", "distance": 3.056, "atom1_id": "///A/22/O", "atom2_id": "///A/25/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 33, "atom1_serNum": 184, "atom2_serNum": 1114, "donAcc_type": "standard", "distance": 2.401, "atom1_id": "///A/23/N", "atom2_id": "///A/133/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 34, "atom1_serNum": 192, "atom2_serNum": 1113, "donAcc_type": "standard", "distance": 3.505, "atom1_id": "///A/24/N", "atom2_id": "///A/133/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 35, "atom1_serNum": 203, "atom2_serNum": 224, "donAcc_type": "standard", "distance": 2.454, "atom1_id": "///A/25/OE1", "atom2_id": "///A/27/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 36, "atom1_serNum": 260, "atom2_serNum": 262, "donAcc_type": "standard", "distance": 3.134, "atom1_id": "///A/31/OD1", "atom2_id": "///A/32/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 37, "atom1_serNum": 260, "atom2_serNum": 273, "donAcc_type": "standard", "distance": 3.077, "atom1_id": "///A/31/OD1", "atom2_id": "///A/33/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 38, "atom1_serNum": 260, "atom2_serNum": 278, "donAcc_type": "acceptable", "distance": 2.812, "atom1_id": "///A/31/OD1", "atom2_id": "///A/33/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 39, "atom1_serNum": 261, "atom2_serNum": 1017, "donAcc_type": "acceptable", "distance": 2.387, "atom1_id": "///A/31/OD2", "atom2_id": "///A/120/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 40, "atom1_serNum": 298, "atom2_serNum": 547, "donAcc_type": "standard", "distance": 2.738, "atom1_id": "///A/35/OE1", "atom2_id": "///A/66/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 41, "atom1_serNum": 298, "atom2_serNum": 555, "donAcc_type": "standard", "distance": 3.450, "atom1_id": "///A/35/OE1", "atom2_id": "///A/67/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 42, "atom1_serNum": 299, "atom2_serNum": 558, "donAcc_type": "standard", "distance": 2.790, "atom1_id": "///A/35/OE2", "atom2_id": "///A/67/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 43, "atom1_serNum": 303, "atom2_serNum": 725, "donAcc_type": "standard", "distance": 3.101, "atom1_id": "///A/36/O", "atom2_id": "///A/87/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 44, "atom1_serNum": 318, "atom2_serNum": 1041, "donAcc_type": "acceptable", "distance": 2.545, "atom1_id": "///A/37/OH", "atom2_id": "///A/123/OD2", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 45, "atom1_serNum": 319, "atom2_serNum": 708, "donAcc_type": "standard", "distance": 3.092, "atom1_id": "///A/38/N", "atom2_id": "///A/85/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 46, "atom1_serNum": 322, "atom2_serNum": 705, "donAcc_type": "standard", "distance": 2.780, "atom1_id": "///A/38/O", "atom2_id": "///A/85/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 47, "atom1_serNum": 330, "atom2_serNum": 918, "donAcc_type": "standard", "distance": 3.087, "atom1_id": "///A/39/N", "atom2_id": "///A/110/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 48, "atom1_serNum": 333, "atom2_serNum": 915, "donAcc_type": "standard", "distance": 3.053, "atom1_id": "///A/39/O", "atom2_id": "///A/110/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 49, "atom1_serNum": 342, "atom2_serNum": 685, "donAcc_type": "standard", "distance": 2.830, "atom1_id": "///A/40/N", "atom2_id": "///A/83/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 50, "atom1_serNum": 345, "atom2_serNum": 682, "donAcc_type": "standard", "distance": 2.885, "atom1_id": "///A/40/O", "atom2_id": "///A/83/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 51, "atom1_serNum": 347, "atom2_serNum": 902, "donAcc_type": "standard", "distance": 2.929, "atom1_id": "///A/41/N", "atom2_id": "///A/108/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 52, "atom1_serNum": 350, "atom2_serNum": 891, "donAcc_type": "standard", "distance": 2.782, "atom1_id": "///A/41/O", "atom2_id": "///A/107/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 53, "atom1_serNum": 350, "atom2_serNum": 899, "donAcc_type": "standard", "distance": 3.504, "atom1_id": "///A/41/O", "atom2_id": "///A/108/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 54, "atom1_serNum": 363, "atom2_serNum": 882, "donAcc_type": "standard", "distance": 2.794, "atom1_id": "///A/43/N", "atom2_id": "///A/105/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 55, "atom1_serNum": 371, "atom2_serNum": 875, "donAcc_type": "standard", "distance": 3.787, "atom1_id": "///A/43/NZ", "atom2_id": "///A/104/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 56, "atom1_serNum": 375, "atom2_serNum": 394, "donAcc_type": "standard", "distance": 3.157, "atom1_id": "///A/44/O", "atom2_id": "///A/47/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 57, "atom1_serNum": 378, "atom2_serNum": 393, "donAcc_type": "acceptable", "distance": 2.225, "atom1_id": "///A/44/OD1", "atom2_id": "///A/46/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 58, "atom1_serNum": 383, "atom2_serNum": 399, "donAcc_type": "standard", "distance": 2.915, "atom1_id": "///A/45/O", "atom2_id": "///A/48/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 59, "atom1_serNum": 386, "atom2_serNum": 690, "donAcc_type": "standard", "distance": 3.115, "atom1_id": "///A/45/OD1", "atom2_id": "///A/83/NE1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 60, "atom1_serNum": 387, "atom2_serNum": 583, "donAcc_type": "standard", "distance": 3.168, "atom1_id": "///A/45/OD2", "atom2_id": "///A/70/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 61, "atom1_serNum": 397, "atom2_serNum": 416, "donAcc_type": "standard", "distance": 2.755, "atom1_id": "///A/47/O", "atom2_id": "///A/50/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 62, "atom1_serNum": 397, "atom2_serNum": 425, "donAcc_type": "standard", "distance": 2.881, "atom1_id": "///A/47/O", "atom2_id": "///A/51/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 63, "atom1_serNum": 402, "atom2_serNum": 432, "donAcc_type": "standard", "distance": 2.827, "atom1_id": "///A/48/O", "atom2_id": "///A/52/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 64, "atom1_serNum": 410, "atom2_serNum": 449, "donAcc_type": "standard", "distance": 2.884, "atom1_id": "///A/49/O", "atom2_id": "///A/53/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 65, "atom1_serNum": 414, "atom2_serNum": 440, "donAcc_type": "standard", "distance": 2.658, "atom1_id": "///A/49/OE1", "atom2_id": "///A/52/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 66, "atom1_serNum": 428, "atom2_serNum": 450, "donAcc_type": "standard", "distance": 3.335, "atom1_id": "///A/51/O", "atom2_id": "///A/54/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 67, "atom1_serNum": 465, "atom2_serNum": 521, "donAcc_type": "standard", "distance": 3.076, "atom1_id": "///A/56/N", "atom2_id": "///A/63/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 68, "atom1_serNum": 468, "atom2_serNum": 518, "donAcc_type": "standard", "distance": 2.611, "atom1_id": "///A/56/O", "atom2_id": "///A/63/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 69, "atom1_serNum": 477, "atom2_serNum": 500, "donAcc_type": "standard", "distance": 3.300, "atom1_id": "///A/57/OE1", "atom2_id": "///A/60/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 70, "atom1_serNum": 479, "atom2_serNum": 507, "donAcc_type": "standard", "distance": 2.948, "atom1_id": "///A/58/N", "atom2_id": "///A/61/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 71, "atom1_serNum": 482, "atom2_serNum": 504, "donAcc_type": "standard", "distance": 2.935, "atom1_id": "///A/58/O", "atom2_id": "///A/61/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 72, "atom1_serNum": 488, "atom2_serNum": 775, "donAcc_type": "standard", "distance": 2.251, "atom1_id": "///A/58/NH1", "atom2_id": "///A/92/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 73, "atom1_serNum": 539, "atom2_serNum": 716, "donAcc_type": "standard", "distance": 2.835, "atom1_id": "///A/66/N", "atom2_id": "///A/86/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 74, "atom1_serNum": 548, "atom2_serNum": 716, "donAcc_type": "standard", "distance": 3.635, "atom1_id": "///A/67/N", "atom2_id": "///A/86/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 75, "atom1_serNum": 551, "atom2_serNum": 713, "donAcc_type": "standard", "distance": 2.781, "atom1_id": "///A/67/O", "atom2_id": "///A/86/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 76, "atom1_serNum": 566, "atom2_serNum": 699, "donAcc_type": "standard", "distance": 3.080, "atom1_id": "///A/69/N", "atom2_id": "///A/84/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 77, "atom1_serNum": 569, "atom2_serNum": 696, "donAcc_type": "standard", "distance": 2.918, "atom1_id": "///A/69/O", "atom2_id": "///A/84/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 78, "atom1_serNum": 573, "atom2_serNum": 724, "donAcc_type": "acceptable", "distance": 2.889, "atom1_id": "///A/69/OE1", "atom2_id": "///A/86/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 79, "atom1_serNum": 583, "atom2_serNum": 674, "donAcc_type": "standard", "distance": 2.985, "atom1_id": "///A/70/NZ", "atom2_id": "///A/81/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 80, "atom1_serNum": 584, "atom2_serNum": 678, "donAcc_type": "standard", "distance": 2.835, "atom1_id": "///A/71/N", "atom2_id": "///A/82/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 81, "atom1_serNum": 587, "atom2_serNum": 675, "donAcc_type": "standard", "distance": 2.926, "atom1_id": "///A/71/O", "atom2_id": "///A/82/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 82, "atom1_serNum": 594, "atom2_serNum": 3026, "donAcc_type": "standard", "distance": 3.169, "atom1_id": "///A/72/O", "atom2_id": "///A/365/ND2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 83, "atom1_serNum": 599, "atom2_serNum": 673, "donAcc_type": "standard", "distance": 2.718, "atom1_id": "///A/72/NE2", "atom2_id": "///A/81/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 84, "atom1_serNum": 600, "atom2_serNum": 662, "donAcc_type": "standard", "distance": 3.060, "atom1_id": "///A/73/N", "atom2_id": "///A/80/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 85, "atom1_serNum": 603, "atom2_serNum": 659, "donAcc_type": "standard", "distance": 2.666, "atom1_id": "///A/73/O", "atom2_id": "///A/80/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 86, "atom1_serNum": 608, "atom2_serNum": 3025, "donAcc_type": "standard", "distance": 2.769, "atom1_id": "///A/73/NZ", "atom2_id": "///A/365/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 87, "atom1_serNum": 609, "atom2_serNum": 3022, "donAcc_type": "standard", "distance": 2.936, "atom1_id": "///A/74/N", "atom2_id": "///A/365/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 88, "atom1_serNum": 612, "atom2_serNum": 3036, "donAcc_type": "standard", "distance": 2.740, "atom1_id": "///A/74/O", "atom2_id": "///A/367/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 89, "atom1_serNum": 617, "atom2_serNum": 3011, "donAcc_type": "standard", "distance": 2.636, "atom1_id": "///A/74/NZ", "atom2_id": "///A/364/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 90, "atom1_serNum": 618, "atom2_serNum": 644, "donAcc_type": "standard", "distance": 2.841, "atom1_id": "///A/75/N", "atom2_id": "///A/78/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 91, "atom1_serNum": 704, "atom2_serNum": 724, "donAcc_type": "acceptable", "distance": 2.809, "atom1_id": "///A/84/NZ", "atom2_id": "///A/86/OH", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 92, "atom1_serNum": 736, "atom2_serNum": 776, "donAcc_type": "standard", "distance": 3.599, "atom1_id": "///A/88/N", "atom2_id": "///A/92/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 93, "atom1_serNum": 746, "atom2_serNum": 769, "donAcc_type": "standard", "distance": 2.959, "atom1_id": "///A/89/O", "atom2_id": "///A/92/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 94, "atom1_serNum": 749, "atom2_serNum": 760, "donAcc_type": "acceptable", "distance": 3.189, "atom1_id": "///A/89/ND1", "atom2_id": "///A/91/N", "atom_pair": "N:N", "residue_pair": "aa:aa" }, { "index": 95, "atom1_serNum": 772, "atom2_serNum": 798, "donAcc_type": "standard", "distance": 3.225, "atom1_id": "///A/92/O", "atom2_id": "///A/96/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 96, "atom1_serNum": 780, "atom2_serNum": 806, "donAcc_type": "standard", "distance": 2.949, "atom1_id": "///A/93/O", "atom2_id": "///A/97/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 97, "atom1_serNum": 785, "atom2_serNum": 939, "donAcc_type": "standard", "distance": 2.796, "atom1_id": "///A/93/NE2", "atom2_id": "///A/112/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 98, "atom1_serNum": 801, "atom2_serNum": 825, "donAcc_type": "standard", "distance": 2.877, "atom1_id": "///A/96/O", "atom2_id": "///A/99/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 99, "atom1_serNum": 801, "atom2_serNum": 834, "donAcc_type": "standard", "distance": 2.964, "atom1_id": "///A/96/O", "atom2_id": "///A/100/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 100, "atom1_serNum": 809, "atom2_serNum": 842, "donAcc_type": "standard", "distance": 2.833, "atom1_id": "///A/97/O", "atom2_id": "///A/101/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 101, "atom1_serNum": 815, "atom2_serNum": 939, "donAcc_type": "standard", "distance": 3.590, "atom1_id": "///A/97/NH1", "atom2_id": "///A/112/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 102, "atom1_serNum": 820, "atom2_serNum": 853, "donAcc_type": "standard", "distance": 2.906, "atom1_id": "///A/98/O", "atom2_id": "///A/102/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 103, "atom1_serNum": 824, "atom2_serNum": 852, "donAcc_type": "standard", "distance": 2.717, "atom1_id": "///A/98/OD2", "atom2_id": "///A/101/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 104, "atom1_serNum": 837, "atom2_serNum": 862, "donAcc_type": "standard", "distance": 3.163, "atom1_id": "///A/100/O", "atom2_id": "///A/103/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 105, "atom1_serNum": 865, "atom2_serNum": 884, "donAcc_type": "standard", "distance": 3.122, "atom1_id": "///A/103/O", "atom2_id": "///A/106/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 106, "atom1_serNum": 868, "atom2_serNum": 879, "donAcc_type": "acceptable", "distance": 2.975, "atom1_id": "///A/103/ND1", "atom2_id": "///A/105/N", "atom_pair": "N:N", "residue_pair": "aa:aa" }, { "index": 107, "atom1_serNum": 905, "atom2_serNum": 907, "donAcc_type": "standard", "distance": 2.602, "atom1_id": "///A/108/OD1", "atom2_id": "///A/109/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 108, "atom1_serNum": 910, "atom2_serNum": 3063, "donAcc_type": "standard", "distance": 2.685, "atom1_id": "///A/109/O", "atom2_id": "///A/370/ND2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 109, "atom1_serNum": 927, "atom2_serNum": 3062, "donAcc_type": "standard", "distance": 3.901, "atom1_id": "///A/111/N", "atom2_id": "///A/370/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 110, "atom1_serNum": 934, "atom2_serNum": 1005, "donAcc_type": "standard", "distance": 2.629, "atom1_id": "///A/111/OE1", "atom2_id": "///A/119/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 111, "atom1_serNum": 935, "atom2_serNum": 3044, "donAcc_type": "standard", "distance": 3.034, "atom1_id": "///A/111/OE2", "atom2_id": "///A/368/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 112, "atom1_serNum": 948, "atom2_serNum": 954, "donAcc_type": "standard", "distance": 2.694, "atom1_id": "///A/113/N", "atom2_id": "///A/113/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 113, "atom1_serNum": 954, "atom2_serNum": 4166, "donAcc_type": "standard", "distance": 3.593, "atom1_id": "///A/113/OD1", "atom2_id": "///A/503/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 114, "atom1_serNum": 955, "atom2_serNum": 3072, "donAcc_type": "standard", "distance": 3.973, "atom1_id": "///A/113/OD2", "atom2_id": "///A/371/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 115, "atom1_serNum": 966, "atom2_serNum": 995, "donAcc_type": "standard", "distance": 2.786, "atom1_id": "///A/115/O", "atom2_id": "///A/119/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 116, "atom1_serNum": 973, "atom2_serNum": 1006, "donAcc_type": "standard", "distance": 2.995, "atom1_id": "///A/116/O", "atom2_id": "///A/120/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 117, "atom1_serNum": 984, "atom2_serNum": 1018, "donAcc_type": "standard", "distance": 3.290, "atom1_id": "///A/117/O", "atom2_id": "///A/121/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 118, "atom1_serNum": 989, "atom2_serNum": 1026, "donAcc_type": "standard", "distance": 3.185, "atom1_id": "///A/118/O", "atom2_id": "///A/122/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 119, "atom1_serNum": 998, "atom2_serNum": 1034, "donAcc_type": "standard", "distance": 3.022, "atom1_id": "///A/119/O", "atom2_id": "///A/123/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 120, "atom1_serNum": 1004, "atom2_serNum": 1040, "donAcc_type": "standard", "distance": 3.096, "atom1_id": "///A/119/NH1", "atom2_id": "///A/123/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 121, "atom1_serNum": 1009, "atom2_serNum": 1042, "donAcc_type": "standard", "distance": 3.032, "atom1_id": "///A/120/O", "atom2_id": "///A/124/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 122, "atom1_serNum": 1021, "atom2_serNum": 1055, "donAcc_type": "standard", "distance": 2.958, "atom1_id": "///A/121/O", "atom2_id": "///A/126/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 123, "atom1_serNum": 1029, "atom2_serNum": 1051, "donAcc_type": "standard", "distance": 2.996, "atom1_id": "///A/122/O", "atom2_id": "///A/125/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 124, "atom1_serNum": 1034, "atom2_serNum": 1040, "donAcc_type": "standard", "distance": 2.792, "atom1_id": "///A/123/N", "atom2_id": "///A/123/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 125, "atom1_serNum": 1037, "atom2_serNum": 2998, "donAcc_type": "acceptable", "distance": 3.477, "atom1_id": "///A/123/O", "atom2_id": "///A/362/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 126, "atom1_serNum": 1058, "atom2_serNum": 2971, "donAcc_type": "standard", "distance": 3.076, "atom1_id": "///A/126/O", "atom2_id": "///A/359/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 127, "atom1_serNum": 1058, "atom2_serNum": 2972, "donAcc_type": "standard", "distance": 3.043, "atom1_id": "///A/126/O", "atom2_id": "///A/359/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 128, "atom1_serNum": 1093, "atom2_serNum": 2764, "donAcc_type": "standard", "distance": 3.934, "atom1_id": "///A/130/OE2", "atom2_id": "///A/335/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 129, "atom1_serNum": 1098, "atom2_serNum": 1104, "donAcc_type": "standard", "distance": 2.727, "atom1_id": "///A/132/N", "atom2_id": "///A/132/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 130, "atom1_serNum": 1127, "atom2_serNum": 1141, "donAcc_type": "standard", "distance": 3.382, "atom1_id": "///A/135/O", "atom2_id": "///A/137/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 131, "atom1_serNum": 1132, "atom2_serNum": 1691, "donAcc_type": "standard", "distance": 2.967, "atom1_id": "///A/136/N", "atom2_id": "///A/204/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 132, "atom1_serNum": 1135, "atom2_serNum": 1684, "donAcc_type": "standard", "distance": 2.578, "atom1_id": "///A/136/O", "atom2_id": "///A/204/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 133, "atom1_serNum": 1135, "atom2_serNum": 1692, "donAcc_type": "standard", "distance": 3.223, "atom1_id": "///A/136/O", "atom2_id": "///A/205/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 134, "atom1_serNum": 1140, "atom2_serNum": 1357, "donAcc_type": "standard", "distance": 3.967, "atom1_id": "///A/136/NZ", "atom2_id": "///A/164/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 135, "atom1_serNum": 1149, "atom2_serNum": 1695, "donAcc_type": "standard", "distance": 2.971, "atom1_id": "///A/138/N", "atom2_id": "///A/205/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 136, "atom1_serNum": 1152, "atom2_serNum": 1707, "donAcc_type": "standard", "distance": 2.843, "atom1_id": "///A/138/O", "atom2_id": "///A/207/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 137, "atom1_serNum": 1157, "atom2_serNum": 1348, "donAcc_type": "standard", "distance": 3.041, "atom1_id": "///A/139/N", "atom2_id": "///A/163/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 138, "atom1_serNum": 1160, "atom2_serNum": 1345, "donAcc_type": "standard", "distance": 3.135, "atom1_id": "///A/139/O", "atom2_id": "///A/163/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 139, "atom1_serNum": 1162, "atom2_serNum": 1710, "donAcc_type": "standard", "distance": 3.145, "atom1_id": "///A/140/N", "atom2_id": "///A/207/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 140, "atom1_serNum": 1173, "atom2_serNum": 1330, "donAcc_type": "standard", "distance": 2.964, "atom1_id": "///A/141/N", "atom2_id": "///A/161/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 141, "atom1_serNum": 1176, "atom2_serNum": 1327, "donAcc_type": "standard", "distance": 2.898, "atom1_id": "///A/141/O", "atom2_id": "///A/161/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 142, "atom1_serNum": 1186, "atom2_serNum": 1314, "donAcc_type": "standard", "distance": 3.020, "atom1_id": "///A/143/N", "atom2_id": "///A/159/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 143, "atom1_serNum": 1189, "atom2_serNum": 1303, "donAcc_type": "standard", "distance": 2.602, "atom1_id": "///A/143/O", "atom2_id": "///A/158/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 144, "atom1_serNum": 1189, "atom2_serNum": 1311, "donAcc_type": "standard", "distance": 3.119, "atom1_id": "///A/143/O", "atom2_id": "///A/159/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 145, "atom1_serNum": 1198, "atom2_serNum": 1291, "donAcc_type": "standard", "distance": 3.148, "atom1_id": "///A/145/N", "atom2_id": "///A/156/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 146, "atom1_serNum": 1209, "atom2_serNum": 2442, "donAcc_type": "acceptable", "distance": 2.467, "atom1_id": "///A/146/O", "atom2_id": "///A/296/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 147, "atom1_serNum": 1221, "atom2_serNum": 1241, "donAcc_type": "standard", "distance": 3.556, "atom1_id": "///A/147/O", "atom2_id": "///A/150/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 148, "atom1_serNum": 1227, "atom2_serNum": 2478, "donAcc_type": "standard", "distance": 2.737, "atom1_id": "///A/147/NE2", "atom2_id": "///A/300/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 149, "atom1_serNum": 1250, "atom2_serNum": 1282, "donAcc_type": "standard", "distance": 3.532, "atom1_id": "///A/151/N", "atom2_id": "///A/154/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 150, "atom1_serNum": 1253, "atom2_serNum": 1275, "donAcc_type": "standard", "distance": 3.519, "atom1_id": "///A/151/O", "atom2_id": "///A/154/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 151, "atom1_serNum": 1273, "atom2_serNum": 1844, "donAcc_type": "standard", "distance": 3.130, "atom1_id": "///A/153/O", "atom2_id": "///A/222/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 152, "atom1_serNum": 1287, "atom2_serNum": 1808, "donAcc_type": "acceptable", "distance": 2.396, "atom1_id": "///A/155/O", "atom2_id": "///A/218/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 153, "atom1_serNum": 1295, "atom2_serNum": 1541, "donAcc_type": "standard", "distance": 2.695, "atom1_id": "///A/157/N", "atom2_id": "///A/187/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 154, "atom1_serNum": 1298, "atom2_serNum": 1426, "donAcc_type": "standard", "distance": 3.129, "atom1_id": "///A/157/O", "atom2_id": "///A/173/NE1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 155, "atom1_serNum": 1306, "atom2_serNum": 1416, "donAcc_type": "acceptable", "distance": 2.968, "atom1_id": "///A/158/O", "atom2_id": "///A/172/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 156, "atom1_serNum": 1319, "atom2_serNum": 1406, "donAcc_type": "standard", "distance": 2.921, "atom1_id": "///A/160/N", "atom2_id": "///A/171/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 157, "atom1_serNum": 1322, "atom2_serNum": 1403, "donAcc_type": "standard", "distance": 2.703, "atom1_id": "///A/160/O", "atom2_id": "///A/171/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 158, "atom1_serNum": 1332, "atom2_serNum": 2573, "donAcc_type": "acceptable", "distance": 2.838, "atom1_id": "///A/161/OG", "atom2_id": "///A/312/O", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 159, "atom1_serNum": 1333, "atom2_serNum": 1388, "donAcc_type": "standard", "distance": 3.002, "atom1_id": "///A/162/N", "atom2_id": "///A/169/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 160, "atom1_serNum": 1336, "atom2_serNum": 1385, "donAcc_type": "standard", "distance": 2.879, "atom1_id": "///A/162/O", "atom2_id": "///A/169/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 161, "atom1_serNum": 1350, "atom2_serNum": 1356, "donAcc_type": "standard", "distance": 2.752, "atom1_id": "///A/164/N", "atom2_id": "///A/164/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 162, "atom1_serNum": 1350, "atom2_serNum": 1379, "donAcc_type": "standard", "distance": 3.091, "atom1_id": "///A/164/N", "atom2_id": "///A/167/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 163, "atom1_serNum": 1353, "atom2_serNum": 1376, "donAcc_type": "standard", "distance": 3.207, "atom1_id": "///A/164/O", "atom2_id": "///A/167/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 164, "atom1_serNum": 1356, "atom2_serNum": 1367, "donAcc_type": "standard", "distance": 2.906, "atom1_id": "///A/164/OD1", "atom2_id": "///A/166/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 165, "atom1_serNum": 1357, "atom2_serNum": 1668, "donAcc_type": "standard", "distance": 2.956, "atom1_id": "///A/164/OD2", "atom2_id": "///A/201/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 166, "atom1_serNum": 1358, "atom2_serNum": 1366, "donAcc_type": "standard", "distance": 2.712, "atom1_id": "///A/165/N", "atom2_id": "///A/165/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 167, "atom1_serNum": 1392, "atom2_serNum": 1505, "donAcc_type": "standard", "distance": 2.739, "atom1_id": "///A/169/NE", "atom2_id": "///A/182/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 168, "atom1_serNum": 1395, "atom2_serNum": 1475, "donAcc_type": "standard", "distance": 3.077, "atom1_id": "///A/169/NH2", "atom2_id": "///A/179/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 169, "atom1_serNum": 1395, "atom2_serNum": 1504, "donAcc_type": "standard", "distance": 2.781, "atom1_id": "///A/169/NH2", "atom2_id": "///A/182/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 170, "atom1_serNum": 1396, "atom2_serNum": 1482, "donAcc_type": "standard", "distance": 2.891, "atom1_id": "///A/170/N", "atom2_id": "///A/180/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 171, "atom1_serNum": 1399, "atom2_serNum": 1498, "donAcc_type": "standard", "distance": 2.813, "atom1_id": "///A/170/O", "atom2_id": "///A/182/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 172, "atom1_serNum": 1411, "atom2_serNum": 1501, "donAcc_type": "standard", "distance": 3.264, "atom1_id": "///A/172/N", "atom2_id": "///A/182/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 173, "atom1_serNum": 1414, "atom2_serNum": 1513, "donAcc_type": "standard", "distance": 2.956, "atom1_id": "///A/172/O", "atom2_id": "///A/184/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 174, "atom1_serNum": 1435, "atom2_serNum": 1449, "donAcc_type": "standard", "distance": 3.212, "atom1_id": "///A/174/O", "atom2_id": "///A/176/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 175, "atom1_serNum": 1452, "atom2_serNum": 1464, "donAcc_type": "standard", "distance": 2.922, "atom1_id": "///A/176/O", "atom2_id": "///A/178/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 176, "atom1_serNum": 1467, "atom2_serNum": 1491, "donAcc_type": "standard", "distance": 3.094, "atom1_id": "///A/178/O", "atom2_id": "///A/181/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 177, "atom1_serNum": 1529, "atom2_serNum": 1562, "donAcc_type": "standard", "distance": 3.120, "atom1_id": "///A/186/O", "atom2_id": "///A/190/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 178, "atom1_serNum": 1531, "atom2_serNum": 1553, "donAcc_type": "acceptable", "distance": 3.052, "atom1_id": "///A/186/OG1", "atom2_id": "///A/189/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 179, "atom1_serNum": 1536, "atom2_serNum": 1570, "donAcc_type": "standard", "distance": 2.958, "atom1_id": "///A/187/O", "atom2_id": "///A/191/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 180, "atom1_serNum": 1540, "atom2_serNum": 1845, "donAcc_type": "standard", "distance": 2.763, "atom1_id": "///A/187/OE1", "atom2_id": "///A/222/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 181, "atom1_serNum": 1541, "atom2_serNum": 1842, "donAcc_type": "standard", "distance": 3.069, "atom1_id": "///A/187/OE2", "atom2_id": "///A/222/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 182, "atom1_serNum": 1545, "atom2_serNum": 1578, "donAcc_type": "standard", "distance": 3.065, "atom1_id": "///A/188/O", "atom2_id": "///A/192/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 183, "atom1_serNum": 1549, "atom2_serNum": 1873, "donAcc_type": "standard", "distance": 3.019, "atom1_id": "///A/188/NE", "atom2_id": "///A/226/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 184, "atom1_serNum": 1551, "atom2_serNum": 1586, "donAcc_type": "questionable", "distance": 2.967, "atom1_id": "///A/188/NH1", "atom2_id": "///A/192/NZ", "atom_pair": "N:N", "residue_pair": "aa:aa" }, { "index": 185, "atom1_serNum": 1552, "atom2_serNum": 1873, "donAcc_type": "standard", "distance": 2.549, "atom1_id": "///A/188/NH2", "atom2_id": "///A/226/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 186, "atom1_serNum": 1556, "atom2_serNum": 1587, "donAcc_type": "standard", "distance": 2.816, "atom1_id": "///A/189/O", "atom2_id": "///A/193/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 187, "atom1_serNum": 1561, "atom2_serNum": 1627, "donAcc_type": "standard", "distance": 3.430, "atom1_id": "///A/189/OE2", "atom2_id": "///A/196/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 188, "atom1_serNum": 1565, "atom2_serNum": 1598, "donAcc_type": "standard", "distance": 3.052, "atom1_id": "///A/190/O", "atom2_id": "///A/194/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 189, "atom1_serNum": 1573, "atom2_serNum": 1609, "donAcc_type": "standard", "distance": 2.908, "atom1_id": "///A/191/O", "atom2_id": "///A/195/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 190, "atom1_serNum": 1581, "atom2_serNum": 1617, "donAcc_type": "standard", "distance": 3.069, "atom1_id": "///A/192/O", "atom2_id": "///A/196/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 191, "atom1_serNum": 1590, "atom2_serNum": 1628, "donAcc_type": "standard", "distance": 3.147, "atom1_id": "///A/193/O", "atom2_id": "///A/197/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 192, "atom1_serNum": 1601, "atom2_serNum": 1635, "donAcc_type": "standard", "distance": 3.112, "atom1_id": "///A/194/O", "atom2_id": "///A/198/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 193, "atom1_serNum": 1612, "atom2_serNum": 1642, "donAcc_type": "standard", "distance": 3.011, "atom1_id": "///A/195/O", "atom2_id": "///A/199/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 194, "atom1_serNum": 1620, "atom2_serNum": 1651, "donAcc_type": "standard", "distance": 2.800, "atom1_id": "///A/196/O", "atom2_id": "///A/200/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 195, "atom1_serNum": 1631, "atom2_serNum": 1660, "donAcc_type": "standard", "distance": 2.703, "atom1_id": "///A/197/O", "atom2_id": "///A/201/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 196, "atom1_serNum": 1638, "atom2_serNum": 1669, "donAcc_type": "standard", "distance": 2.711, "atom1_id": "///A/198/O", "atom2_id": "///A/202/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 197, "atom1_serNum": 1675, "atom2_serNum": 1933, "donAcc_type": "standard", "distance": 2.682, "atom1_id": "///A/202/OD1", "atom2_id": "///A/234/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 198, "atom1_serNum": 1675, "atom2_serNum": 1936, "donAcc_type": "standard", "distance": 3.122, "atom1_id": "///A/202/OD1", "atom2_id": "///A/234/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 199, "atom1_serNum": 1675, "atom2_serNum": 2100, "donAcc_type": "standard", "distance": 2.838, "atom1_id": "///A/202/OD1", "atom2_id": "///A/255/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 200, "atom1_serNum": 1680, "atom2_serNum": 2100, "donAcc_type": "standard", "distance": 3.006, "atom1_id": "///A/203/O", "atom2_id": "///A/255/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 201, "atom1_serNum": 1687, "atom2_serNum": 2102, "donAcc_type": "standard", "distance": 2.773, "atom1_id": "///A/204/O", "atom2_id": "///A/256/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 202, "atom1_serNum": 1690, "atom2_serNum": 1935, "donAcc_type": "standard", "distance": 2.922, "atom1_id": "///A/204/OD1", "atom2_id": "///A/234/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 203, "atom1_serNum": 1690, "atom2_serNum": 1936, "donAcc_type": "standard", "distance": 2.703, "atom1_id": "///A/204/OD1", "atom2_id": "///A/234/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 204, "atom1_serNum": 1699, "atom2_serNum": 2105, "donAcc_type": "standard", "distance": 2.888, "atom1_id": "///A/206/N", "atom2_id": "///A/256/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 205, "atom1_serNum": 1702, "atom2_serNum": 2120, "donAcc_type": "standard", "distance": 2.880, "atom1_id": "///A/206/O", "atom2_id": "///A/258/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 206, "atom1_serNum": 1715, "atom2_serNum": 2123, "donAcc_type": "standard", "distance": 3.184, "atom1_id": "///A/208/N", "atom2_id": "///A/258/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 207, "atom1_serNum": 1718, "atom2_serNum": 2139, "donAcc_type": "standard", "distance": 2.783, "atom1_id": "///A/208/O", "atom2_id": "///A/260/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 208, "atom1_serNum": 1720, "atom2_serNum": 1742, "donAcc_type": "acceptable", "distance": 3.103, "atom1_id": "///A/208/OG1", "atom2_id": "///A/211/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 209, "atom1_serNum": 1720, "atom2_serNum": 2119, "donAcc_type": "acceptable", "distance": 2.732, "atom1_id": "///A/208/OG1", "atom2_id": "///A/257/NE2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 210, "atom1_serNum": 1733, "atom2_serNum": 2251, "donAcc_type": "acceptable", "distance": 2.571, "atom1_id": "///A/209/OH", "atom2_id": "///A/273/O", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 211, "atom1_serNum": 1734, "atom2_serNum": 2137, "donAcc_type": "standard", "distance": 2.743, "atom1_id": "///A/210/N", "atom2_id": "///A/259/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 212, "atom1_serNum": 1737, "atom2_serNum": 1762, "donAcc_type": "standard", "distance": 3.123, "atom1_id": "///A/210/O", "atom2_id": "///A/214/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 213, "atom1_serNum": 1740, "atom2_serNum": 1761, "donAcc_type": "standard", "distance": 3.128, "atom1_id": "///A/210/OD1", "atom2_id": "///A/213/ND2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 214, "atom1_serNum": 1745, "atom2_serNum": 1781, "donAcc_type": "standard", "distance": 3.422, "atom1_id": "///A/211/O", "atom2_id": "///A/216/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 215, "atom1_serNum": 1746, "atom2_serNum": 2138, "donAcc_type": "standard", "distance": 2.891, "atom1_id": "///A/212/N", "atom2_id": "///A/259/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 216, "atom1_serNum": 1752, "atom2_serNum": 2055, "donAcc_type": "standard", "distance": 3.100, "atom1_id": "///A/212/OD1", "atom2_id": "///A/250/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 217, "atom1_serNum": 1752, "atom2_serNum": 2856, "donAcc_type": "standard", "distance": 2.938, "atom1_id": "///A/212/OD1", "atom2_id": "///A/346/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 218, "atom1_serNum": 1753, "atom2_serNum": 2853, "donAcc_type": "standard", "distance": 2.840, "atom1_id": "///A/212/OD2", "atom2_id": "///A/346/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 219, "atom1_serNum": 1760, "atom2_serNum": 2039, "donAcc_type": "standard", "distance": 3.477, "atom1_id": "///A/213/OD1", "atom2_id": "///A/248/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 220, "atom1_serNum": 1765, "atom2_serNum": 1797, "donAcc_type": "standard", "distance": 2.784, "atom1_id": "///A/214/O", "atom2_id": "///A/218/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 221, "atom1_serNum": 1773, "atom2_serNum": 1779, "donAcc_type": "standard", "distance": 2.782, "atom1_id": "///A/215/N", "atom2_id": "///A/215/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 222, "atom1_serNum": 1776, "atom2_serNum": 1809, "donAcc_type": "standard", "distance": 3.072, "atom1_id": "///A/215/O", "atom2_id": "///A/219/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 223, "atom1_serNum": 1784, "atom2_serNum": 1817, "donAcc_type": "standard", "distance": 2.892, "atom1_id": "///A/216/O", "atom2_id": "///A/220/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 224, "atom1_serNum": 1795, "atom2_serNum": 1826, "donAcc_type": "standard", "distance": 3.115, "atom1_id": "///A/217/O", "atom2_id": "///A/221/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 225, "atom1_serNum": 1800, "atom2_serNum": 1835, "donAcc_type": "standard", "distance": 2.967, "atom1_id": "///A/218/O", "atom2_id": "///A/222/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 226, "atom1_serNum": 1812, "atom2_serNum": 1846, "donAcc_type": "standard", "distance": 2.789, "atom1_id": "///A/219/O", "atom2_id": "///A/223/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 227, "atom1_serNum": 1820, "atom2_serNum": 1852, "donAcc_type": "standard", "distance": 3.020, "atom1_id": "///A/220/O", "atom2_id": "///A/224/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 228, "atom1_serNum": 1829, "atom2_serNum": 1861, "donAcc_type": "standard", "distance": 3.229, "atom1_id": "///A/221/O", "atom2_id": "///A/225/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 229, "atom1_serNum": 1838, "atom2_serNum": 1870, "donAcc_type": "standard", "distance": 2.999, "atom1_id": "///A/222/O", "atom2_id": "///A/226/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 230, "atom1_serNum": 1849, "atom2_serNum": 1878, "donAcc_type": "standard", "distance": 2.912, "atom1_id": "///A/223/O", "atom2_id": "///A/227/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 231, "atom1_serNum": 1849, "atom2_serNum": 1882, "donAcc_type": "standard", "distance": 2.890, "atom1_id": "///A/223/O", "atom2_id": "///A/228/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 232, "atom1_serNum": 1893, "atom2_serNum": 1909, "donAcc_type": "standard", "distance": 2.901, "atom1_id": "///A/229/O", "atom2_id": "///A/231/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 233, "atom1_serNum": 1898, "atom2_serNum": 1963, "donAcc_type": "standard", "distance": 3.120, "atom1_id": "///A/230/N", "atom2_id": "///A/238/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 234, "atom1_serNum": 1901, "atom2_serNum": 1914, "donAcc_type": "standard", "distance": 2.919, "atom1_id": "///A/230/O", "atom2_id": "///A/232/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 235, "atom1_serNum": 1917, "atom2_serNum": 2098, "donAcc_type": "standard", "distance": 2.853, "atom1_id": "///A/232/O", "atom2_id": "///A/255/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 236, "atom1_serNum": 1917, "atom2_serNum": 2101, "donAcc_type": "standard", "distance": 3.033, "atom1_id": "///A/232/O", "atom2_id": "///A/255/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 237, "atom1_serNum": 1922, "atom2_serNum": 1952, "donAcc_type": "standard", "distance": 2.749, "atom1_id": "///A/233/N", "atom2_id": "///A/237/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 238, "atom1_serNum": 1925, "atom2_serNum": 1945, "donAcc_type": "standard", "distance": 2.951, "atom1_id": "///A/233/O", "atom2_id": "///A/236/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 239, "atom1_serNum": 1926, "atom2_serNum": 2081, "donAcc_type": "standard", "distance": 2.783, "atom1_id": "///A/234/N", "atom2_id": "///A/253/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 240, "atom1_serNum": 1935, "atom2_serNum": 2090, "donAcc_type": "standard", "distance": 2.893, "atom1_id": "///A/234/NH1", "atom2_id": "///A/254/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 241, "atom1_serNum": 1937, "atom2_serNum": 1943, "donAcc_type": "standard", "distance": 2.669, "atom1_id": "///A/235/N", "atom2_id": "///A/235/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 242, "atom1_serNum": 1943, "atom2_serNum": 1949, "donAcc_type": "standard", "distance": 3.170, "atom1_id": "///A/235/OD1", "atom2_id": "///A/237/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 243, "atom1_serNum": 1943, "atom2_serNum": 1954, "donAcc_type": "acceptable", "distance": 2.505, "atom1_id": "///A/235/OD1", "atom2_id": "///A/237/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 244, "atom1_serNum": 1971, "atom2_serNum": 2065, "donAcc_type": "standard", "distance": 2.984, "atom1_id": "///A/240/N", "atom2_id": "///A/251/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 245, "atom1_serNum": 1974, "atom2_serNum": 2062, "donAcc_type": "standard", "distance": 2.831, "atom1_id": "///A/240/O", "atom2_id": "///A/251/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 246, "atom1_serNum": 1988, "atom2_serNum": 2053, "donAcc_type": "standard", "distance": 2.759, "atom1_id": "///A/242/N", "atom2_id": "///A/249/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 247, "atom1_serNum": 1991, "atom2_serNum": 2050, "donAcc_type": "standard", "distance": 2.913, "atom1_id": "///A/242/O", "atom2_id": "///A/249/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 248, "atom1_serNum": 1996, "atom2_serNum": 6825, "donAcc_type": "acceptable", "distance": 3.604, "atom1_id": "///A/242/NE2", "atom2_id": "///A/802/O1", "atom_pair": "N:O", "residue_pair": "aa:ligand" }, { "index": 249, "atom1_serNum": 2007, "atom2_serNum": 2019, "donAcc_type": "standard", "distance": 3.448, "atom1_id": "///A/243/NH2", "atom2_id": "///A/245/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 250, "atom1_serNum": 2008, "atom2_serNum": 2031, "donAcc_type": "standard", "distance": 2.761, "atom1_id": "///A/244/N", "atom2_id": "///A/247/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 251, "atom1_serNum": 2011, "atom2_serNum": 2020, "donAcc_type": "standard", "distance": 2.920, "atom1_id": "///A/244/O", "atom2_id": "///A/246/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 252, "atom1_serNum": 2011, "atom2_serNum": 2028, "donAcc_type": "standard", "distance": 2.929, "atom1_id": "///A/244/O", "atom2_id": "///A/247/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 253, "atom1_serNum": 2058, "atom2_serNum": 2116, "donAcc_type": "acceptable", "distance": 2.727, "atom1_id": "///A/250/O", "atom2_id": "///A/257/ND1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 254, "atom1_serNum": 2058, "atom2_serNum": 2819, "donAcc_type": "standard", "distance": 2.905, "atom1_id": "///A/250/O", "atom2_id": "///A/342/NE1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 255, "atom1_serNum": 2070, "atom2_serNum": 6829, "donAcc_type": "acceptable", "distance": 2.887, "atom1_id": "///A/251/OE2", "atom2_id": "///A/802/O3", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 256, "atom1_serNum": 2074, "atom2_serNum": 2091, "donAcc_type": "standard", "distance": 2.898, "atom1_id": "///A/252/O", "atom2_id": "///A/255/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 257, "atom1_serNum": 2105, "atom2_serNum": 2120, "donAcc_type": "standard", "distance": 3.256, "atom1_id": "///A/256/O", "atom2_id": "///A/258/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 258, "atom1_serNum": 2113, "atom2_serNum": 2855, "donAcc_type": "standard", "distance": 2.938, "atom1_id": "///A/257/O", "atom2_id": "///A/346/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 259, "atom1_serNum": 2113, "atom2_serNum": 2856, "donAcc_type": "standard", "distance": 2.852, "atom1_id": "///A/257/O", "atom2_id": "///A/346/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 260, "atom1_serNum": 2137, "atom2_serNum": 2139, "donAcc_type": "standard", "distance": 3.021, "atom1_id": "///A/259/OD1", "atom2_id": "///A/260/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 261, "atom1_serNum": 2137, "atom2_serNum": 2147, "donAcc_type": "standard", "distance": 2.965, "atom1_id": "///A/259/OD1", "atom2_id": "///A/261/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 262, "atom1_serNum": 2142, "atom2_serNum": 2173, "donAcc_type": "standard", "distance": 2.954, "atom1_id": "///A/260/O", "atom2_id": "///A/264/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 263, "atom1_serNum": 2150, "atom2_serNum": 2181, "donAcc_type": "standard", "distance": 3.136, "atom1_id": "///A/261/O", "atom2_id": "///A/265/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 264, "atom1_serNum": 2169, "atom2_serNum": 2203, "donAcc_type": "standard", "distance": 3.247, "atom1_id": "///A/263/O", "atom2_id": "///A/267/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 265, "atom1_serNum": 2169, "atom2_serNum": 2208, "donAcc_type": "acceptable", "distance": 3.000, "atom1_id": "///A/263/O", "atom2_id": "///A/267/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 266, "atom1_serNum": 2176, "atom2_serNum": 2210, "donAcc_type": "standard", "distance": 3.021, "atom1_id": "///A/264/O", "atom2_id": "///A/268/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 267, "atom1_serNum": 2190, "atom2_serNum": 5487, "donAcc_type": "questionable", "distance": 3.364, "atom1_id": "///A/265/NH1", "atom2_id": "///A/665/NE2", "atom_pair": "N:N", "residue_pair": "aa:aa" }, { "index": 268, "atom1_serNum": 2201, "atom2_serNum": 2843, "donAcc_type": "standard", "distance": 3.014, "atom1_id": "///A/266/NH1", "atom2_id": "///A/345/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 269, "atom1_serNum": 2202, "atom2_serNum": 2843, "donAcc_type": "standard", "distance": 3.311, "atom1_id": "///A/266/NH2", "atom2_id": "///A/345/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 270, "atom1_serNum": 2213, "atom2_serNum": 2259, "donAcc_type": "acceptable", "distance": 2.426, "atom1_id": "///A/268/O", "atom2_id": "///A/273/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 271, "atom1_serNum": 2224, "atom2_serNum": 5065, "donAcc_type": "standard", "distance": 2.501, "atom1_id": "///A/269/OD1", "atom2_id": "///A/613/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 272, "atom1_serNum": 2224, "atom2_serNum": 6428, "donAcc_type": "questionable", "distance": 3.053, "atom1_id": "///A/269/OD1", "atom2_id": "///P/11/OP2", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 273, "atom1_serNum": 2225, "atom2_serNum": 6428, "donAcc_type": "standard", "distance": 3.339, "atom1_id": "///A/269/ND2", "atom2_id": "///P/11/OP2", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 274, "atom1_serNum": 2226, "atom2_serNum": 2259, "donAcc_type": "acceptable", "distance": 3.218, "atom1_id": "///A/270/N", "atom2_id": "///A/273/OH", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 275, "atom1_serNum": 2259, "atom2_serNum": 5065, "donAcc_type": "acceptable", "distance": 3.409, "atom1_id": "///A/273/OH", "atom2_id": "///A/613/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 276, "atom1_serNum": 2263, "atom2_serNum": 2289, "donAcc_type": "standard", "distance": 2.952, "atom1_id": "///A/274/O", "atom2_id": "///A/278/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 277, "atom1_serNum": 2265, "atom2_serNum": 2284, "donAcc_type": "acceptable", "distance": 2.922, "atom1_id": "///A/274/OG1", "atom2_id": "///A/277/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 278, "atom1_serNum": 2270, "atom2_serNum": 2296, "donAcc_type": "standard", "distance": 3.082, "atom1_id": "///A/275/O", "atom2_id": "///A/279/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 279, "atom1_serNum": 2278, "atom2_serNum": 2308, "donAcc_type": "standard", "distance": 3.097, "atom1_id": "///A/276/O", "atom2_id": "///A/280/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 280, "atom1_serNum": 2283, "atom2_serNum": 2368, "donAcc_type": "standard", "distance": 2.750, "atom1_id": "///A/276/OE2", "atom2_id": "///A/287/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 281, "atom1_serNum": 2287, "atom2_serNum": 2317, "donAcc_type": "standard", "distance": 3.147, "atom1_id": "///A/277/O", "atom2_id": "///A/281/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 282, "atom1_serNum": 2292, "atom2_serNum": 2322, "donAcc_type": "standard", "distance": 3.200, "atom1_id": "///A/278/O", "atom2_id": "///A/282/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 283, "atom1_serNum": 2299, "atom2_serNum": 2329, "donAcc_type": "standard", "distance": 3.018, "atom1_id": "///A/279/O", "atom2_id": "///A/283/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 284, "atom1_serNum": 2307, "atom2_serNum": 2648, "donAcc_type": "acceptable", "distance": 3.858, "atom1_id": "///A/279/OH", "atom2_id": "///A/321/OE1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 285, "atom1_serNum": 2311, "atom2_serNum": 2340, "donAcc_type": "standard", "distance": 2.679, "atom1_id": "///A/280/O", "atom2_id": "///A/284/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 286, "atom1_serNum": 2316, "atom2_serNum": 2360, "donAcc_type": "standard", "distance": 3.282, "atom1_id": "///A/280/OE2", "atom2_id": "///A/287/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 287, "atom1_serNum": 2368, "atom2_serNum": 2599, "donAcc_type": "standard", "distance": 2.677, "atom1_id": "///A/287/NZ", "atom2_id": "///A/315/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 288, "atom1_serNum": 2377, "atom2_serNum": 2533, "donAcc_type": "standard", "distance": 2.576, "atom1_id": "///A/288/OE2", "atom2_id": "///A/307/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 289, "atom1_serNum": 2377, "atom2_serNum": 2534, "donAcc_type": "standard", "distance": 2.802, "atom1_id": "///A/288/OE2", "atom2_id": "///A/307/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 290, "atom1_serNum": 2386, "atom2_serNum": 2569, "donAcc_type": "acceptable", "distance": 3.205, "atom1_id": "///A/289/NZ", "atom2_id": "///A/311/OH", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 291, "atom1_serNum": 2390, "atom2_serNum": 2569, "donAcc_type": "acceptable", "distance": 3.690, "atom1_id": "///A/290/O", "atom2_id": "///A/311/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 292, "atom1_serNum": 2394, "atom2_serNum": 2428, "donAcc_type": "standard", "distance": 3.275, "atom1_id": "///A/291/N", "atom2_id": "///A/294/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 293, "atom1_serNum": 2397, "atom2_serNum": 2420, "donAcc_type": "standard", "distance": 2.988, "atom1_id": "///A/291/O", "atom2_id": "///A/294/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 294, "atom1_serNum": 2397, "atom2_serNum": 2429, "donAcc_type": "standard", "distance": 2.810, "atom1_id": "///A/291/O", "atom2_id": "///A/295/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 295, "atom1_serNum": 2409, "atom2_serNum": 2437, "donAcc_type": "standard", "distance": 2.938, "atom1_id": "///A/292/O", "atom2_id": "///A/296/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 296, "atom1_serNum": 2409, "atom2_serNum": 2442, "donAcc_type": "acceptable", "distance": 3.095, "atom1_id": "///A/292/O", "atom2_id": "///A/296/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 297, "atom1_serNum": 2414, "atom2_serNum": 2444, "donAcc_type": "standard", "distance": 2.978, "atom1_id": "///A/293/O", "atom2_id": "///A/297/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 298, "atom1_serNum": 2414, "atom2_serNum": 2449, "donAcc_type": "acceptable", "distance": 2.985, "atom1_id": "///A/293/O", "atom2_id": "///A/297/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 299, "atom1_serNum": 2423, "atom2_serNum": 2451, "donAcc_type": "standard", "distance": 2.864, "atom1_id": "///A/294/O", "atom2_id": "///A/298/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 300, "atom1_serNum": 2427, "atom2_serNum": 2534, "donAcc_type": "standard", "distance": 3.319, "atom1_id": "///A/294/OE1", "atom2_id": "///A/307/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 301, "atom1_serNum": 2432, "atom2_serNum": 2456, "donAcc_type": "standard", "distance": 3.201, "atom1_id": "///A/295/O", "atom2_id": "///A/299/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 302, "atom1_serNum": 2440, "atom2_serNum": 2470, "donAcc_type": "standard", "distance": 3.075, "atom1_id": "///A/296/O", "atom2_id": "///A/300/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 303, "atom1_serNum": 2447, "atom2_serNum": 2479, "donAcc_type": "standard", "distance": 3.027, "atom1_id": "///A/297/O", "atom2_id": "///A/301/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 304, "atom1_serNum": 2447, "atom2_serNum": 2484, "donAcc_type": "acceptable", "distance": 3.136, "atom1_id": "///A/297/O", "atom2_id": "///A/301/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 305, "atom1_serNum": 2454, "atom2_serNum": 2486, "donAcc_type": "standard", "distance": 2.911, "atom1_id": "///A/298/O", "atom2_id": "///A/302/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 306, "atom1_serNum": 2454, "atom2_serNum": 2490, "donAcc_type": "standard", "distance": 3.248, "atom1_id": "///A/298/O", "atom2_id": "///A/303/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 307, "atom1_serNum": 2484, "atom2_serNum": 2490, "donAcc_type": "acceptable", "distance": 3.100, "atom1_id": "///A/301/OG1", "atom2_id": "///A/303/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 308, "atom1_serNum": 2502, "atom2_serNum": 2535, "donAcc_type": "standard", "distance": 3.880, "atom1_id": "///A/304/O", "atom2_id": "///A/308/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 309, "atom1_serNum": 2510, "atom2_serNum": 2542, "donAcc_type": "standard", "distance": 2.954, "atom1_id": "///A/305/O", "atom2_id": "///A/309/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 310, "atom1_serNum": 2518, "atom2_serNum": 2547, "donAcc_type": "standard", "distance": 2.915, "atom1_id": "///A/306/O", "atom2_id": "///A/310/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 311, "atom1_serNum": 2527, "atom2_serNum": 2556, "donAcc_type": "standard", "distance": 2.904, "atom1_id": "///A/307/O", "atom2_id": "///A/310/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 312, "atom1_serNum": 2527, "atom2_serNum": 2558, "donAcc_type": "standard", "distance": 3.267, "atom1_id": "///A/307/O", "atom2_id": "///A/311/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 313, "atom1_serNum": 2538, "atom2_serNum": 2570, "donAcc_type": "standard", "distance": 2.895, "atom1_id": "///A/308/O", "atom2_id": "///A/312/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 314, "atom1_serNum": 2545, "atom2_serNum": 2576, "donAcc_type": "standard", "distance": 2.869, "atom1_id": "///A/309/O", "atom2_id": "///A/313/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 315, "atom1_serNum": 2550, "atom2_serNum": 2584, "donAcc_type": "standard", "distance": 2.931, "atom1_id": "///A/310/O", "atom2_id": "///A/314/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 316, "atom1_serNum": 2554, "atom2_serNum": 2592, "donAcc_type": "standard", "distance": 3.270, "atom1_id": "///A/310/NE", "atom2_id": "///A/314/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 317, "atom1_serNum": 2561, "atom2_serNum": 2593, "donAcc_type": "standard", "distance": 3.045, "atom1_id": "///A/311/O", "atom2_id": "///A/315/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 318, "atom1_serNum": 2573, "atom2_serNum": 2601, "donAcc_type": "standard", "distance": 3.402, "atom1_id": "///A/312/O", "atom2_id": "///A/316/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 319, "atom1_serNum": 2579, "atom2_serNum": 2606, "donAcc_type": "standard", "distance": 3.013, "atom1_id": "///A/313/O", "atom2_id": "///A/317/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 320, "atom1_serNum": 2587, "atom2_serNum": 2615, "donAcc_type": "standard", "distance": 2.827, "atom1_id": "///A/314/O", "atom2_id": "///A/318/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 321, "atom1_serNum": 2596, "atom2_serNum": 2622, "donAcc_type": "standard", "distance": 3.083, "atom1_id": "///A/315/O", "atom2_id": "///A/319/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 322, "atom1_serNum": 2596, "atom2_serNum": 2627, "donAcc_type": "acceptable", "distance": 2.679, "atom1_id": "///A/315/O", "atom2_id": "///A/319/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 323, "atom1_serNum": 2604, "atom2_serNum": 2629, "donAcc_type": "standard", "distance": 3.009, "atom1_id": "///A/316/O", "atom2_id": "///A/320/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 324, "atom1_serNum": 2609, "atom2_serNum": 2641, "donAcc_type": "standard", "distance": 3.135, "atom1_id": "///A/317/O", "atom2_id": "///A/321/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 325, "atom1_serNum": 2614, "atom2_serNum": 2649, "donAcc_type": "standard", "distance": 2.264, "atom1_id": "///A/317/NZ", "atom2_id": "///A/321/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 326, "atom1_serNum": 2618, "atom2_serNum": 2650, "donAcc_type": "standard", "distance": 2.850, "atom1_id": "///A/318/O", "atom2_id": "///A/322/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 327, "atom1_serNum": 2625, "atom2_serNum": 2658, "donAcc_type": "standard", "distance": 2.910, "atom1_id": "///A/319/O", "atom2_id": "///A/323/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 328, "atom1_serNum": 2632, "atom2_serNum": 2662, "donAcc_type": "standard", "distance": 2.919, "atom1_id": "///A/320/O", "atom2_id": "///A/324/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 329, "atom1_serNum": 2644, "atom2_serNum": 2671, "donAcc_type": "standard", "distance": 3.190, "atom1_id": "///A/321/O", "atom2_id": "///A/325/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 330, "atom1_serNum": 2653, "atom2_serNum": 2671, "donAcc_type": "standard", "distance": 3.016, "atom1_id": "///A/322/O", "atom2_id": "///A/325/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 331, "atom1_serNum": 2653, "atom2_serNum": 2680, "donAcc_type": "standard", "distance": 2.997, "atom1_id": "///A/322/O", "atom2_id": "///A/326/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 332, "atom1_serNum": 2661, "atom2_serNum": 2691, "donAcc_type": "standard", "distance": 3.027, "atom1_id": "///A/323/O", "atom2_id": "///A/327/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 333, "atom1_serNum": 2683, "atom2_serNum": 2714, "donAcc_type": "standard", "distance": 3.238, "atom1_id": "///A/326/O", "atom2_id": "///A/330/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 334, "atom1_serNum": 2694, "atom2_serNum": 2723, "donAcc_type": "standard", "distance": 2.638, "atom1_id": "///A/327/O", "atom2_id": "///A/331/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 335, "atom1_serNum": 2702, "atom2_serNum": 2728, "donAcc_type": "standard", "distance": 3.013, "atom1_id": "///A/328/O", "atom2_id": "///A/332/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 336, "atom1_serNum": 2709, "atom2_serNum": 2737, "donAcc_type": "standard", "distance": 3.228, "atom1_id": "///A/329/O", "atom2_id": "///A/333/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 337, "atom1_serNum": 2717, "atom2_serNum": 2745, "donAcc_type": "standard", "distance": 3.088, "atom1_id": "///A/330/O", "atom2_id": "///A/334/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 338, "atom1_serNum": 2722, "atom2_serNum": 6821, "donAcc_type": "unknown", "distance": 2.796, "atom1_id": "///A/330/OE2", "atom2_id": "///A/801/N3", "atom_pair": "O:N", "residue_pair": "aa:ligand" }, { "index": 339, "atom1_serNum": 2726, "atom2_serNum": 2757, "donAcc_type": "standard", "distance": 3.107, "atom1_id": "///A/331/O", "atom2_id": "///A/335/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 340, "atom1_serNum": 2731, "atom2_serNum": 2768, "donAcc_type": "standard", "distance": 2.997, "atom1_id": "///A/332/O", "atom2_id": "///A/336/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 341, "atom1_serNum": 2735, "atom2_serNum": 2766, "donAcc_type": "standard", "distance": 2.990, "atom1_id": "///A/332/OE1", "atom2_id": "///A/335/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 342, "atom1_serNum": 2740, "atom2_serNum": 2776, "donAcc_type": "standard", "distance": 2.895, "atom1_id": "///A/333/O", "atom2_id": "///A/337/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 343, "atom1_serNum": 2751, "atom2_serNum": 2784, "donAcc_type": "standard", "distance": 2.835, "atom1_id": "///A/334/O", "atom2_id": "///A/338/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 344, "atom1_serNum": 2751, "atom2_serNum": 2788, "donAcc_type": "standard", "distance": 3.372, "atom1_id": "///A/334/O", "atom2_id": "///A/339/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 345, "atom1_serNum": 2755, "atom2_serNum": 2791, "donAcc_type": "acceptable", "distance": 2.414, "atom1_id": "///A/334/OG", "atom2_id": "///A/339/O", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 346, "atom1_serNum": 2779, "atom2_serNum": 2969, "donAcc_type": "standard", "distance": 3.889, "atom1_id": "///A/337/O", "atom2_id": "///A/359/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 347, "atom1_serNum": 2787, "atom2_serNum": 2972, "donAcc_type": "standard", "distance": 2.663, "atom1_id": "///A/338/O", "atom2_id": "///A/359/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 348, "atom1_serNum": 2800, "atom2_serNum": 2833, "donAcc_type": "standard", "distance": 2.883, "atom1_id": "///A/340/O", "atom2_id": "///A/344/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 349, "atom1_serNum": 2802, "atom2_serNum": 2825, "donAcc_type": "acceptable", "distance": 3.198, "atom1_id": "///A/340/OG", "atom2_id": "///A/343/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 350, "atom1_serNum": 2802, "atom2_serNum": 2832, "donAcc_type": "acceptable", "distance": 2.701, "atom1_id": "///A/340/OG", "atom2_id": "///A/343/OD2", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 351, "atom1_serNum": 2806, "atom2_serNum": 2840, "donAcc_type": "standard", "distance": 2.958, "atom1_id": "///A/341/O", "atom2_id": "///A/345/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 352, "atom1_serNum": 2806, "atom2_serNum": 2845, "donAcc_type": "acceptable", "distance": 2.789, "atom1_id": "///A/341/O", "atom2_id": "///A/345/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 353, "atom1_serNum": 2814, "atom2_serNum": 2855, "donAcc_type": "standard", "distance": 3.163, "atom1_id": "///A/342/O", "atom2_id": "///A/346/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 354, "atom1_serNum": 2828, "atom2_serNum": 2846, "donAcc_type": "standard", "distance": 3.086, "atom1_id": "///A/343/O", "atom2_id": "///A/346/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 355, "atom1_serNum": 2828, "atom2_serNum": 2857, "donAcc_type": "standard", "distance": 3.086, "atom1_id": "///A/343/O", "atom2_id": "///A/347/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 356, "atom1_serNum": 2828, "atom2_serNum": 2862, "donAcc_type": "acceptable", "distance": 2.340, "atom1_id": "///A/343/O", "atom2_id": "///A/347/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 357, "atom1_serNum": 2831, "atom2_serNum": 6825, "donAcc_type": "acceptable", "distance": 3.106, "atom1_id": "///A/343/OD1", "atom2_id": "///A/802/O1", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 358, "atom1_serNum": 2832, "atom2_serNum": 6827, "donAcc_type": "acceptable", "distance": 2.713, "atom1_id": "///A/343/OD2", "atom2_id": "///A/802/O2", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 359, "atom1_serNum": 2866, "atom2_serNum": 2888, "donAcc_type": "standard", "distance": 3.037, "atom1_id": "///A/348/O", "atom2_id": "///A/352/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 360, "atom1_serNum": 2872, "atom2_serNum": 2874, "donAcc_type": "acceptable", "distance": 3.077, "atom1_id": "///A/349/O", "atom2_id": "///A/349/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 361, "atom1_serNum": 2872, "atom2_serNum": 2896, "donAcc_type": "standard", "distance": 3.060, "atom1_id": "///A/349/O", "atom2_id": "///A/353/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 362, "atom1_serNum": 2874, "atom2_serNum": 6831, "donAcc_type": "acceptable", "distance": 3.021, "atom1_id": "///A/349/OG1", "atom2_id": "///A/803/O1", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 363, "atom1_serNum": 2879, "atom2_serNum": 2903, "donAcc_type": "standard", "distance": 3.046, "atom1_id": "///A/350/O", "atom2_id": "///A/354/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 364, "atom1_serNum": 2883, "atom2_serNum": 2921, "donAcc_type": "standard", "distance": 2.993, "atom1_id": "///A/351/O", "atom2_id": "///A/355/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 365, "atom1_serNum": 2891, "atom2_serNum": 2935, "donAcc_type": "standard", "distance": 3.098, "atom1_id": "///A/352/O", "atom2_id": "///A/356/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 366, "atom1_serNum": 2899, "atom2_serNum": 2946, "donAcc_type": "standard", "distance": 2.912, "atom1_id": "///A/353/O", "atom2_id": "///A/357/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 367, "atom1_serNum": 2909, "atom2_serNum": 2954, "donAcc_type": "standard", "distance": 2.941, "atom1_id": "///A/354/O", "atom2_id": "///A/358/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 368, "atom1_serNum": 2919, "atom2_serNum": 4165, "donAcc_type": "standard", "distance": 2.460, "atom1_id": "///A/354/OE2", "atom2_id": "///A/503/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 369, "atom1_serNum": 2924, "atom2_serNum": 2962, "donAcc_type": "standard", "distance": 3.186, "atom1_id": "///A/355/O", "atom2_id": "///A/359/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 370, "atom1_serNum": 2938, "atom2_serNum": 2973, "donAcc_type": "standard", "distance": 3.118, "atom1_id": "///A/356/O", "atom2_id": "///A/360/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 371, "atom1_serNum": 2949, "atom2_serNum": 2982, "donAcc_type": "standard", "distance": 2.539, "atom1_id": "///A/357/O", "atom2_id": "///A/361/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 372, "atom1_serNum": 2957, "atom2_serNum": 2987, "donAcc_type": "standard", "distance": 2.954, "atom1_id": "///A/358/O", "atom2_id": "///A/362/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 373, "atom1_serNum": 2965, "atom2_serNum": 2999, "donAcc_type": "standard", "distance": 3.015, "atom1_id": "///A/359/O", "atom2_id": "///A/363/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 374, "atom1_serNum": 2976, "atom2_serNum": 3008, "donAcc_type": "standard", "distance": 3.170, "atom1_id": "///A/360/O", "atom2_id": "///A/364/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 375, "atom1_serNum": 2981, "atom2_serNum": 3006, "donAcc_type": "standard", "distance": 3.192, "atom1_id": "///A/360/NZ", "atom2_id": "///A/363/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 376, "atom1_serNum": 2981, "atom2_serNum": 3007, "donAcc_type": "standard", "distance": 3.397, "atom1_id": "///A/360/NZ", "atom2_id": "///A/363/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 377, "atom1_serNum": 2985, "atom2_serNum": 3027, "donAcc_type": "standard", "distance": 2.800, "atom1_id": "///A/361/O", "atom2_id": "///A/366/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 378, "atom1_serNum": 2990, "atom2_serNum": 3019, "donAcc_type": "standard", "distance": 3.237, "atom1_id": "///A/362/O", "atom2_id": "///A/365/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 379, "atom1_serNum": 3006, "atom2_serNum": 3017, "donAcc_type": "standard", "distance": 3.686, "atom1_id": "///A/363/OE1", "atom2_id": "///A/364/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 380, "atom1_serNum": 3018, "atom2_serNum": 3763, "donAcc_type": "standard", "distance": 3.029, "atom1_id": "///A/364/NH2", "atom2_id": "///A/455/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 381, "atom1_serNum": 3030, "atom2_serNum": 3044, "donAcc_type": "standard", "distance": 3.297, "atom1_id": "///A/366/O", "atom2_id": "///A/368/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 382, "atom1_serNum": 3052, "atom2_serNum": 4163, "donAcc_type": "standard", "distance": 2.983, "atom1_id": "///A/369/O", "atom2_id": "///A/503/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 383, "atom1_serNum": 3083, "atom2_serNum": 3115, "donAcc_type": "standard", "distance": 3.109, "atom1_id": "///A/373/O", "atom2_id": "///A/377/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 384, "atom1_serNum": 3086, "atom2_serNum": 3088, "donAcc_type": "standard", "distance": 2.993, "atom1_id": "///A/373/OD1", "atom2_id": "///A/374/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 385, "atom1_serNum": 3086, "atom2_serNum": 3097, "donAcc_type": "standard", "distance": 2.884, "atom1_id": "///A/373/OD1", "atom2_id": "///A/375/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 386, "atom1_serNum": 3086, "atom2_serNum": 3106, "donAcc_type": "standard", "distance": 2.856, "atom1_id": "///A/373/OD1", "atom2_id": "///A/376/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 387, "atom1_serNum": 3091, "atom2_serNum": 3123, "donAcc_type": "standard", "distance": 3.151, "atom1_id": "///A/374/O", "atom2_id": "///A/378/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 388, "atom1_serNum": 3100, "atom2_serNum": 3123, "donAcc_type": "standard", "distance": 3.111, "atom1_id": "///A/375/O", "atom2_id": "///A/378/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 389, "atom1_serNum": 3100, "atom2_serNum": 3128, "donAcc_type": "standard", "distance": 3.274, "atom1_id": "///A/375/O", "atom2_id": "///A/379/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 390, "atom1_serNum": 3109, "atom2_serNum": 3139, "donAcc_type": "standard", "distance": 3.136, "atom1_id": "///A/376/O", "atom2_id": "///A/380/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 391, "atom1_serNum": 3113, "atom2_serNum": 3135, "donAcc_type": "standard", "distance": 2.642, "atom1_id": "///A/376/OE1", "atom2_id": "///A/379/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 392, "atom1_serNum": 3114, "atom2_serNum": 3149, "donAcc_type": "standard", "distance": 3.130, "atom1_id": "///A/376/OE2", "atom2_id": "///A/380/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 393, "atom1_serNum": 3148, "atom2_serNum": 4137, "donAcc_type": "standard", "distance": 2.913, "atom1_id": "///A/380/NH1", "atom2_id": "///A/500/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 394, "atom1_serNum": 3148, "atom2_serNum": 4154, "donAcc_type": "standard", "distance": 3.077, "atom1_id": "///A/380/NH1", "atom2_id": "///A/502/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 395, "atom1_serNum": 3157, "atom2_serNum": 4141, "donAcc_type": "standard", "distance": 2.749, "atom1_id": "///A/381/NE", "atom2_id": "///A/500/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 396, "atom1_serNum": 3160, "atom2_serNum": 4142, "donAcc_type": "standard", "distance": 2.750, "atom1_id": "///A/381/NH2", "atom2_id": "///A/500/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 397, "atom1_serNum": 3190, "atom2_serNum": 6557, "donAcc_type": "acceptable", "distance": 2.737, "atom1_id": "///A/384/OH", "atom2_id": "///T/4/O2'", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 398, "atom1_serNum": 3207, "atom2_serNum": 6860, "donAcc_type": "acceptable", "distance": 2.421, "atom1_id": "///A/385/OE2", "atom2_id": "///A/807/O3", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 399, "atom1_serNum": 3232, "atom2_serNum": 4886, "donAcc_type": "standard", "distance": 2.995, "atom1_id": "///A/389/O", "atom2_id": "///A/591/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 400, "atom1_serNum": 3239, "atom2_serNum": 6854, "donAcc_type": "acceptable", "distance": 2.918, "atom1_id": "///A/390/O", "atom2_id": "///A/806/O2", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 401, "atom1_serNum": 3252, "atom2_serNum": 4876, "donAcc_type": "acceptable", "distance": 3.559, "atom1_id": "///A/391/OE1", "atom2_id": "///A/590/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 402, "atom1_serNum": 3253, "atom2_serNum": 6634, "donAcc_type": "questionable", "distance": 3.229, "atom1_id": "///A/391/OE2", "atom2_id": "///T/8/OP1", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 403, "atom1_serNum": 3257, "atom2_serNum": 3270, "donAcc_type": "standard", "distance": 3.297, "atom1_id": "///A/392/O", "atom2_id": "///A/394/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 404, "atom1_serNum": 3261, "atom2_serNum": 4449, "donAcc_type": "standard", "distance": 2.930, "atom1_id": "///A/393/N", "atom2_id": "///A/537/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 405, "atom1_serNum": 3264, "atom2_serNum": 3301, "donAcc_type": "standard", "distance": 3.279, "atom1_id": "///A/393/O", "atom2_id": "///A/397/NE1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 406, "atom1_serNum": 3279, "atom2_serNum": 4867, "donAcc_type": "standard", "distance": 3.293, "atom1_id": "///A/394/NH1", "atom2_id": "///A/589/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 407, "atom1_serNum": 3280, "atom2_serNum": 6102, "donAcc_type": "standard", "distance": 2.456, "atom1_id": "///A/394/NH2", "atom2_id": "///A/743/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 408, "atom1_serNum": 3281, "atom2_serNum": 4856, "donAcc_type": "standard", "distance": 3.134, "atom1_id": "///A/395/N", "atom2_id": "///A/588/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 409, "atom1_serNum": 3284, "atom2_serNum": 4853, "donAcc_type": "standard", "distance": 3.052, "atom1_id": "///A/395/O", "atom2_id": "///A/588/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 410, "atom1_serNum": 3293, "atom2_serNum": 4841, "donAcc_type": "standard", "distance": 2.810, "atom1_id": "///A/397/N", "atom2_id": "///A/586/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 411, "atom1_serNum": 3296, "atom2_serNum": 4838, "donAcc_type": "standard", "distance": 2.952, "atom1_id": "///A/397/O", "atom2_id": "///A/586/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 412, "atom1_serNum": 3310, "atom2_serNum": 4531, "donAcc_type": "acceptable", "distance": 3.172, "atom1_id": "///A/398/O", "atom2_id": "///A/547/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 413, "atom1_serNum": 3316, "atom2_serNum": 4809, "donAcc_type": "standard", "distance": 3.665, "atom1_id": "///A/399/N", "atom2_id": "///A/583/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 414, "atom1_serNum": 3316, "atom2_serNum": 4821, "donAcc_type": "standard", "distance": 2.951, "atom1_id": "///A/399/N", "atom2_id": "///A/584/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 415, "atom1_serNum": 3319, "atom2_serNum": 4531, "donAcc_type": "acceptable", "distance": 2.362, "atom1_id": "///A/399/O", "atom2_id": "///A/547/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 416, "atom1_serNum": 3323, "atom2_serNum": 4555, "donAcc_type": "standard", "distance": 3.678, "atom1_id": "///A/399/ND2", "atom2_id": "///A/551/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 417, "atom1_serNum": 3324, "atom2_serNum": 4809, "donAcc_type": "standard", "distance": 2.975, "atom1_id": "///A/400/N", "atom2_id": "///A/583/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 418, "atom1_serNum": 3327, "atom2_serNum": 4806, "donAcc_type": "standard", "distance": 2.882, "atom1_id": "///A/400/O", "atom2_id": "///A/583/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 419, "atom1_serNum": 3332, "atom2_serNum": 4524, "donAcc_type": "standard", "distance": 2.944, "atom1_id": "///A/401/N", "atom2_id": "///A/546/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 420, "atom1_serNum": 3335, "atom2_serNum": 4521, "donAcc_type": "standard", "distance": 3.027, "atom1_id": "///A/401/O", "atom2_id": "///A/546/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 421, "atom1_serNum": 3339, "atom2_serNum": 4794, "donAcc_type": "standard", "distance": 3.069, "atom1_id": "///A/402/N", "atom2_id": "///A/581/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 422, "atom1_serNum": 3342, "atom2_serNum": 4782, "donAcc_type": "standard", "distance": 2.937, "atom1_id": "///A/402/O", "atom2_id": "///A/580/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 423, "atom1_serNum": 3342, "atom2_serNum": 4791, "donAcc_type": "standard", "distance": 3.518, "atom1_id": "///A/402/O", "atom2_id": "///A/581/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 424, "atom1_serNum": 3350, "atom2_serNum": 6848, "donAcc_type": "acceptable", "distance": 3.363, "atom1_id": "///A/402/OH", "atom2_id": "///A/805/O1S", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 425, "atom1_serNum": 3351, "atom2_serNum": 4502, "donAcc_type": "standard", "distance": 3.089, "atom1_id": "///A/403/N", "atom2_id": "///A/544/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 426, "atom1_serNum": 3354, "atom2_serNum": 4499, "donAcc_type": "standard", "distance": 2.907, "atom1_id": "///A/403/O", "atom2_id": "///A/544/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 427, "atom1_serNum": 3359, "atom2_serNum": 3365, "donAcc_type": "standard", "distance": 2.794, "atom1_id": "///A/404/N", "atom2_id": "///A/404/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 428, "atom1_serNum": 3359, "atom2_serNum": 4764, "donAcc_type": "standard", "distance": 3.195, "atom1_id": "///A/404/N", "atom2_id": "///A/578/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 429, "atom1_serNum": 3362, "atom2_serNum": 4761, "donAcc_type": "standard", "distance": 2.909, "atom1_id": "///A/404/O", "atom2_id": "///A/578/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 430, "atom1_serNum": 3367, "atom2_serNum": 4490, "donAcc_type": "standard", "distance": 2.723, "atom1_id": "///A/405/N", "atom2_id": "///A/542/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 431, "atom1_serNum": 3370, "atom2_serNum": 3389, "donAcc_type": "standard", "distance": 3.142, "atom1_id": "///A/405/O", "atom2_id": "///A/407/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 432, "atom1_serNum": 3378, "atom2_serNum": 4747, "donAcc_type": "standard", "distance": 2.879, "atom1_id": "///A/406/N", "atom2_id": "///A/576/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 433, "atom1_serNum": 3381, "atom2_serNum": 3427, "donAcc_type": "acceptable", "distance": 3.188, "atom1_id": "///A/406/O", "atom2_id": "///A/411/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 434, "atom1_serNum": 3388, "atom2_serNum": 4734, "donAcc_type": "standard", "distance": 3.332, "atom1_id": "///A/406/NH2", "atom2_id": "///A/574/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 435, "atom1_serNum": 3392, "atom2_serNum": 3422, "donAcc_type": "standard", "distance": 2.947, "atom1_id": "///A/407/O", "atom2_id": "///A/411/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 436, "atom1_serNum": 3392, "atom2_serNum": 3427, "donAcc_type": "acceptable", "distance": 2.684, "atom1_id": "///A/407/O", "atom2_id": "///A/411/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 437, "atom1_serNum": 3394, "atom2_serNum": 4042, "donAcc_type": "acceptable", "distance": 3.532, "atom1_id": "///A/407/OG", "atom2_id": "///A/487/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 438, "atom1_serNum": 3398, "atom2_serNum": 3428, "donAcc_type": "standard", "distance": 3.014, "atom1_id": "///A/408/O", "atom2_id": "///A/412/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 439, "atom1_serNum": 3406, "atom2_serNum": 3436, "donAcc_type": "standard", "distance": 3.085, "atom1_id": "///A/409/O", "atom2_id": "///A/413/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 440, "atom1_serNum": 3418, "atom2_serNum": 3444, "donAcc_type": "standard", "distance": 2.991, "atom1_id": "///A/410/O", "atom2_id": "///A/414/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 441, "atom1_serNum": 3425, "atom2_serNum": 3452, "donAcc_type": "standard", "distance": 2.894, "atom1_id": "///A/411/O", "atom2_id": "///A/415/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 442, "atom1_serNum": 3425, "atom2_serNum": 3457, "donAcc_type": "acceptable", "distance": 2.697, "atom1_id": "///A/411/O", "atom2_id": "///A/415/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 443, "atom1_serNum": 3431, "atom2_serNum": 3459, "donAcc_type": "standard", "distance": 3.091, "atom1_id": "///A/412/O", "atom2_id": "///A/416/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 444, "atom1_serNum": 3439, "atom2_serNum": 3477, "donAcc_type": "standard", "distance": 3.004, "atom1_id": "///A/413/O", "atom2_id": "///A/418/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 445, "atom1_serNum": 3455, "atom2_serNum": 3676, "donAcc_type": "standard", "distance": 2.861, "atom1_id": "///A/415/O", "atom2_id": "///A/443/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 446, "atom1_serNum": 3457, "atom2_serNum": 4731, "donAcc_type": "acceptable", "distance": 3.171, "atom1_id": "///A/415/OG1", "atom2_id": "///A/574/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 447, "atom1_serNum": 3465, "atom2_serNum": 3590, "donAcc_type": "acceptable", "distance": 2.705, "atom1_id": "///A/416/ND1", "atom2_id": "///A/432/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 448, "atom1_serNum": 3468, "atom2_serNum": 4311, "donAcc_type": "acceptable", "distance": 2.842, "atom1_id": "///A/416/NE2", "atom2_id": "///A/520/OH", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 449, "atom1_serNum": 3472, "atom2_serNum": 3510, "donAcc_type": "acceptable", "distance": 2.620, "atom1_id": "///A/417/O", "atom2_id": "///A/422/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 450, "atom1_serNum": 3475, "atom2_serNum": 3700, "donAcc_type": "standard", "distance": 2.835, "atom1_id": "///A/417/OD1", "atom2_id": "///A/447/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 451, "atom1_serNum": 3476, "atom2_serNum": 3665, "donAcc_type": "standard", "distance": 2.898, "atom1_id": "///A/417/ND2", "atom2_id": "///A/442/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 452, "atom1_serNum": 3476, "atom2_serNum": 3688, "donAcc_type": "standard", "distance": 2.666, "atom1_id": "///A/417/ND2", "atom2_id": "///A/445/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 453, "atom1_serNum": 3487, "atom2_serNum": 3505, "donAcc_type": "standard", "distance": 3.206, "atom1_id": "///A/419/O", "atom2_id": "///A/422/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 454, "atom1_serNum": 3487, "atom2_serNum": 3510, "donAcc_type": "acceptable", "distance": 3.178, "atom1_id": "///A/419/O", "atom2_id": "///A/422/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 455, "atom1_serNum": 3489, "atom2_serNum": 3503, "donAcc_type": "acceptable", "distance": 2.344, "atom1_id": "///A/419/OG", "atom2_id": "///A/421/OD1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 456, "atom1_serNum": 3489, "atom2_serNum": 3715, "donAcc_type": "acceptable", "distance": 3.358, "atom1_id": "///A/419/OG", "atom2_id": "///A/449/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 457, "atom1_serNum": 3497, "atom2_serNum": 3503, "donAcc_type": "standard", "distance": 2.505, "atom1_id": "///A/421/N", "atom2_id": "///A/421/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 458, "atom1_serNum": 3500, "atom2_serNum": 3535, "donAcc_type": "standard", "distance": 2.613, "atom1_id": "///A/421/O", "atom2_id": "///A/425/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 459, "atom1_serNum": 3500, "atom2_serNum": 3538, "donAcc_type": "standard", "distance": 2.991, "atom1_id": "///A/421/O", "atom2_id": "///A/425/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 460, "atom1_serNum": 3504, "atom2_serNum": 3704, "donAcc_type": "standard", "distance": 2.888, "atom1_id": "///A/421/OD2", "atom2_id": "///A/448/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 461, "atom1_serNum": 3508, "atom2_serNum": 3662, "donAcc_type": "standard", "distance": 2.790, "atom1_id": "///A/422/O", "atom2_id": "///A/442/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 462, "atom1_serNum": 3520, "atom2_serNum": 3643, "donAcc_type": "standard", "distance": 2.721, "atom1_id": "///A/424/N", "atom2_id": "///A/440/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 463, "atom1_serNum": 3526, "atom2_serNum": 3640, "donAcc_type": "standard", "distance": 3.008, "atom1_id": "///A/424/OD1", "atom2_id": "///A/440/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 464, "atom1_serNum": 3558, "atom2_serNum": 3684, "donAcc_type": "standard", "distance": 2.987, "atom1_id": "///A/429/N", "atom2_id": "///A/444/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 465, "atom1_serNum": 3562, "atom2_serNum": 3683, "donAcc_type": "standard", "distance": 3.038, "atom1_id": "///A/430/N", "atom2_id": "///A/444/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 466, "atom1_serNum": 3565, "atom2_serNum": 3668, "donAcc_type": "standard", "distance": 2.760, "atom1_id": "///A/430/O", "atom2_id": "///A/443/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 467, "atom1_serNum": 3583, "atom2_serNum": 3654, "donAcc_type": "standard", "distance": 3.166, "atom1_id": "///A/432/N", "atom2_id": "///A/441/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 468, "atom1_serNum": 3586, "atom2_serNum": 3651, "donAcc_type": "standard", "distance": 3.010, "atom1_id": "///A/432/O", "atom2_id": "///A/441/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 469, "atom1_serNum": 3590, "atom2_serNum": 3676, "donAcc_type": "standard", "distance": 3.279, "atom1_id": "///A/432/OD2", "atom2_id": "///A/443/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 470, "atom1_serNum": 3594, "atom2_serNum": 6838, "donAcc_type": "acceptable", "distance": 2.660, "atom1_id": "///A/433/O", "atom2_id": "///A/804/O3", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 471, "atom1_serNum": 3598, "atom2_serNum": 3633, "donAcc_type": "standard", "distance": 2.838, "atom1_id": "///A/434/N", "atom2_id": "///A/439/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 472, "atom1_serNum": 3601, "atom2_serNum": 3626, "donAcc_type": "standard", "distance": 3.064, "atom1_id": "///A/434/O", "atom2_id": "///A/438/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 473, "atom1_serNum": 3606, "atom2_serNum": 3619, "donAcc_type": "standard", "distance": 2.545, "atom1_id": "///A/435/O", "atom2_id": "///A/437/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 474, "atom1_serNum": 3617, "atom2_serNum": 4290, "donAcc_type": "standard", "distance": 2.908, "atom1_id": "///A/436/OE1", "atom2_id": "///A/518/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 475, "atom1_serNum": 3636, "atom2_serNum": 4242, "donAcc_type": "acceptable", "distance": 2.901, "atom1_id": "///A/439/ND1", "atom2_id": "///A/512/OG", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 476, "atom1_serNum": 3703, "atom2_serNum": 3730, "donAcc_type": "standard", "distance": 3.058, "atom1_id": "///A/447/O", "atom2_id": "///A/451/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 477, "atom1_serNum": 3703, "atom2_serNum": 3735, "donAcc_type": "acceptable", "distance": 2.457, "atom1_id": "///A/447/O", "atom2_id": "///A/451/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 478, "atom1_serNum": 3707, "atom2_serNum": 3736, "donAcc_type": "standard", "distance": 3.347, "atom1_id": "///A/448/O", "atom2_id": "///A/452/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 479, "atom1_serNum": 3718, "atom2_serNum": 3744, "donAcc_type": "standard", "distance": 3.052, "atom1_id": "///A/449/O", "atom2_id": "///A/453/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 480, "atom1_serNum": 3726, "atom2_serNum": 3752, "donAcc_type": "standard", "distance": 2.959, "atom1_id": "///A/450/O", "atom2_id": "///A/454/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 481, "atom1_serNum": 3733, "atom2_serNum": 3756, "donAcc_type": "standard", "distance": 2.962, "atom1_id": "///A/451/O", "atom2_id": "///A/455/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 482, "atom1_serNum": 3739, "atom2_serNum": 3764, "donAcc_type": "standard", "distance": 2.808, "atom1_id": "///A/452/O", "atom2_id": "///A/456/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 483, "atom1_serNum": 3747, "atom2_serNum": 3772, "donAcc_type": "standard", "distance": 2.877, "atom1_id": "///A/453/O", "atom2_id": "///A/457/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 484, "atom1_serNum": 3755, "atom2_serNum": 3780, "donAcc_type": "standard", "distance": 3.018, "atom1_id": "///A/454/O", "atom2_id": "///A/458/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 485, "atom1_serNum": 3759, "atom2_serNum": 3789, "donAcc_type": "standard", "distance": 2.860, "atom1_id": "///A/455/O", "atom2_id": "///A/459/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 486, "atom1_serNum": 3767, "atom2_serNum": 3798, "donAcc_type": "standard", "distance": 2.776, "atom1_id": "///A/456/O", "atom2_id": "///A/460/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 487, "atom1_serNum": 3775, "atom2_serNum": 3809, "donAcc_type": "standard", "distance": 3.209, "atom1_id": "///A/457/O", "atom2_id": "///A/461/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 488, "atom1_serNum": 3783, "atom2_serNum": 3818, "donAcc_type": "standard", "distance": 3.039, "atom1_id": "///A/458/O", "atom2_id": "///A/462/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 489, "atom1_serNum": 3792, "atom2_serNum": 3827, "donAcc_type": "standard", "distance": 2.939, "atom1_id": "///A/459/O", "atom2_id": "///A/463/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 490, "atom1_serNum": 3797, "atom2_serNum": 3994, "donAcc_type": "standard", "distance": 3.141, "atom1_id": "///A/459/OE2", "atom2_id": "///A/482/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 491, "atom1_serNum": 3797, "atom2_serNum": 3997, "donAcc_type": "standard", "distance": 3.013, "atom1_id": "///A/459/OE2", "atom2_id": "///A/482/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 492, "atom1_serNum": 3801, "atom2_serNum": 3835, "donAcc_type": "standard", "distance": 2.889, "atom1_id": "///A/460/O", "atom2_id": "///A/464/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 493, "atom1_serNum": 3805, "atom2_serNum": 4001, "donAcc_type": "standard", "distance": 2.962, "atom1_id": "///A/460/NE", "atom2_id": "///A/483/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 494, "atom1_serNum": 3805, "atom2_serNum": 4005, "donAcc_type": "standard", "distance": 3.174, "atom1_id": "///A/460/NE", "atom2_id": "///A/483/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 495, "atom1_serNum": 3808, "atom2_serNum": 4005, "donAcc_type": "standard", "distance": 3.268, "atom1_id": "///A/460/NH2", "atom2_id": "///A/483/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 496, "atom1_serNum": 3812, "atom2_serNum": 3844, "donAcc_type": "standard", "distance": 3.084, "atom1_id": "///A/461/O", "atom2_id": "///A/465/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 497, "atom1_serNum": 3821, "atom2_serNum": 3853, "donAcc_type": "standard", "distance": 3.104, "atom1_id": "///A/462/O", "atom2_id": "///A/466/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 498, "atom1_serNum": 3830, "atom2_serNum": 3862, "donAcc_type": "standard", "distance": 2.897, "atom1_id": "///A/463/O", "atom2_id": "///A/467/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 499, "atom1_serNum": 3847, "atom2_serNum": 3879, "donAcc_type": "standard", "distance": 3.387, "atom1_id": "///A/465/O", "atom2_id": "///A/469/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 500, "atom1_serNum": 3856, "atom2_serNum": 3884, "donAcc_type": "standard", "distance": 3.295, "atom1_id": "///A/466/O", "atom2_id": "///A/470/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 501, "atom1_serNum": 3856, "atom2_serNum": 3889, "donAcc_type": "acceptable", "distance": 2.789, "atom1_id": "///A/466/O", "atom2_id": "///A/470/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 502, "atom1_serNum": 3865, "atom2_serNum": 3940, "donAcc_type": "standard", "distance": 2.642, "atom1_id": "///A/467/O", "atom2_id": "///A/476/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 503, "atom1_serNum": 3873, "atom2_serNum": 3940, "donAcc_type": "standard", "distance": 3.799, "atom1_id": "///A/468/O", "atom2_id": "///A/476/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 504, "atom1_serNum": 3887, "atom2_serNum": 3940, "donAcc_type": "standard", "distance": 3.906, "atom1_id": "///A/470/O", "atom2_id": "///A/476/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 505, "atom1_serNum": 3902, "atom2_serNum": 3931, "donAcc_type": "standard", "distance": 3.479, "atom1_id": "///A/472/O", "atom2_id": "///A/476/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 506, "atom1_serNum": 3905, "atom2_serNum": 3907, "donAcc_type": "standard", "distance": 2.866, "atom1_id": "///A/472/OD1", "atom2_id": "///A/473/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 507, "atom1_serNum": 3905, "atom2_serNum": 3914, "donAcc_type": "standard", "distance": 3.056, "atom1_id": "///A/472/OD1", "atom2_id": "///A/474/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 508, "atom1_serNum": 3910, "atom2_serNum": 3942, "donAcc_type": "standard", "distance": 3.117, "atom1_id": "///A/473/O", "atom2_id": "///A/477/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 509, "atom1_serNum": 3917, "atom2_serNum": 3942, "donAcc_type": "standard", "distance": 2.999, "atom1_id": "///A/474/O", "atom2_id": "///A/477/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 510, "atom1_serNum": 3917, "atom2_serNum": 3951, "donAcc_type": "standard", "distance": 2.927, "atom1_id": "///A/474/O", "atom2_id": "///A/478/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 511, "atom1_serNum": 3922, "atom2_serNum": 3929, "donAcc_type": "standard", "distance": 2.481, "atom1_id": "///A/475/N", "atom2_id": "///A/475/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 512, "atom1_serNum": 3925, "atom2_serNum": 3959, "donAcc_type": "standard", "distance": 2.532, "atom1_id": "///A/475/O", "atom2_id": "///A/479/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 513, "atom1_serNum": 3934, "atom2_serNum": 3967, "donAcc_type": "standard", "distance": 2.962, "atom1_id": "///A/476/O", "atom2_id": "///A/480/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 514, "atom1_serNum": 3945, "atom2_serNum": 3975, "donAcc_type": "standard", "distance": 2.899, "atom1_id": "///A/477/O", "atom2_id": "///A/481/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 515, "atom1_serNum": 3954, "atom2_serNum": 3987, "donAcc_type": "standard", "distance": 2.989, "atom1_id": "///A/478/O", "atom2_id": "///A/482/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 516, "atom1_serNum": 3962, "atom2_serNum": 3998, "donAcc_type": "standard", "distance": 3.099, "atom1_id": "///A/479/O", "atom2_id": "///A/483/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 517, "atom1_serNum": 3970, "atom2_serNum": 4007, "donAcc_type": "standard", "distance": 3.019, "atom1_id": "///A/480/O", "atom2_id": "///A/484/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 518, "atom1_serNum": 3973, "atom2_serNum": 4006, "donAcc_type": "standard", "distance": 2.798, "atom1_id": "///A/480/OD1", "atom2_id": "///A/483/NE2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 519, "atom1_serNum": 3974, "atom2_serNum": 4016, "donAcc_type": "standard", "distance": 3.056, "atom1_id": "///A/480/OD2", "atom2_id": "///A/484/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 520, "atom1_serNum": 3978, "atom2_serNum": 4018, "donAcc_type": "standard", "distance": 3.072, "atom1_id": "///A/481/O", "atom2_id": "///A/485/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 521, "atom1_serNum": 3990, "atom2_serNum": 4026, "donAcc_type": "standard", "distance": 3.029, "atom1_id": "///A/482/O", "atom2_id": "///A/486/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 522, "atom1_serNum": 4001, "atom2_serNum": 4034, "donAcc_type": "standard", "distance": 3.315, "atom1_id": "///A/483/O", "atom2_id": "///A/487/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 523, "atom1_serNum": 4010, "atom2_serNum": 4043, "donAcc_type": "standard", "distance": 3.279, "atom1_id": "///A/484/O", "atom2_id": "///A/488/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 524, "atom1_serNum": 4021, "atom2_serNum": 4051, "donAcc_type": "standard", "distance": 2.743, "atom1_id": "///A/485/O", "atom2_id": "///A/489/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 525, "atom1_serNum": 4029, "atom2_serNum": 4059, "donAcc_type": "standard", "distance": 2.913, "atom1_id": "///A/486/O", "atom2_id": "///A/490/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 526, "atom1_serNum": 4037, "atom2_serNum": 4064, "donAcc_type": "standard", "distance": 3.255, "atom1_id": "///A/487/O", "atom2_id": "///A/491/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 527, "atom1_serNum": 4046, "atom2_serNum": 4072, "donAcc_type": "standard", "distance": 2.880, "atom1_id": "///A/488/O", "atom2_id": "///A/492/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 528, "atom1_serNum": 4046, "atom2_serNum": 4077, "donAcc_type": "acceptable", "distance": 2.472, "atom1_id": "///A/488/O", "atom2_id": "///A/492/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 529, "atom1_serNum": 4054, "atom2_serNum": 4078, "donAcc_type": "standard", "distance": 2.859, "atom1_id": "///A/489/O", "atom2_id": "///A/493/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 530, "atom1_serNum": 4062, "atom2_serNum": 4085, "donAcc_type": "standard", "distance": 3.358, "atom1_id": "///A/490/O", "atom2_id": "///A/494/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 531, "atom1_serNum": 4067, "atom2_serNum": 4097, "donAcc_type": "standard", "distance": 3.037, "atom1_id": "///A/491/O", "atom2_id": "///A/495/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 532, "atom1_serNum": 4071, "atom2_serNum": 6502, "donAcc_type": "standard", "distance": 3.094, "atom1_id": "///A/491/ND2", "atom2_id": "///T/1/N1", "atom_pair": "N:N", "residue_pair": "aa:nt" }, { "index": 533, "atom1_serNum": 4075, "atom2_serNum": 4101, "donAcc_type": "standard", "distance": 2.947, "atom1_id": "///A/492/O", "atom2_id": "///A/496/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 534, "atom1_serNum": 4075, "atom2_serNum": 6543, "donAcc_type": "standard", "distance": 3.085, "atom1_id": "///A/492/O", "atom2_id": "///T/3/N4", "atom_pair": "O:N", "residue_pair": "aa:nt" }, { "index": 535, "atom1_serNum": 4077, "atom2_serNum": 6832, "donAcc_type": "acceptable", "distance": 3.180, "atom1_id": "///A/492/OG", "atom2_id": "///A/803/O2", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 536, "atom1_serNum": 4088, "atom2_serNum": 4111, "donAcc_type": "standard", "distance": 3.030, "atom1_id": "///A/494/O", "atom2_id": "///A/497/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 537, "atom1_serNum": 4104, "atom2_serNum": 4123, "donAcc_type": "standard", "distance": 3.137, "atom1_id": "///A/496/O", "atom2_id": "///A/499/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 538, "atom1_serNum": 4107, "atom2_serNum": 6540, "donAcc_type": "acceptable", "distance": 2.692, "atom1_id": "///A/496/ND1", "atom2_id": "///T/3/O2", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 539, "atom1_serNum": 4114, "atom2_serNum": 4193, "donAcc_type": "standard", "distance": 2.952, "atom1_id": "///A/497/O", "atom2_id": "///A/506/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 540, "atom1_serNum": 4126, "atom2_serNum": 4151, "donAcc_type": "standard", "distance": 3.078, "atom1_id": "///A/499/O", "atom2_id": "///A/502/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 541, "atom1_serNum": 4146, "atom2_serNum": 4150, "donAcc_type": "standard", "distance": 3.001, "atom1_id": "///A/501/O", "atom2_id": "///A/501/ND2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 542, "atom1_serNum": 4196, "atom2_serNum": 4223, "donAcc_type": "standard", "distance": 3.168, "atom1_id": "///A/506/O", "atom2_id": "///A/510/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 543, "atom1_serNum": 4202, "atom2_serNum": 4228, "donAcc_type": "standard", "distance": 2.985, "atom1_id": "///A/507/O", "atom2_id": "///A/511/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 544, "atom1_serNum": 4208, "atom2_serNum": 4215, "donAcc_type": "standard", "distance": 2.546, "atom1_id": "///A/508/N", "atom2_id": "///A/508/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 545, "atom1_serNum": 4211, "atom2_serNum": 4237, "donAcc_type": "standard", "distance": 2.984, "atom1_id": "///A/508/O", "atom2_id": "///A/512/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 546, "atom1_serNum": 4211, "atom2_serNum": 4242, "donAcc_type": "acceptable", "distance": 2.541, "atom1_id": "///A/508/O", "atom2_id": "///A/512/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 547, "atom1_serNum": 4220, "atom2_serNum": 4243, "donAcc_type": "standard", "distance": 3.057, "atom1_id": "///A/509/O", "atom2_id": "///A/513/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 548, "atom1_serNum": 4226, "atom2_serNum": 4250, "donAcc_type": "standard", "distance": 3.174, "atom1_id": "///A/510/O", "atom2_id": "///A/514/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 549, "atom1_serNum": 4231, "atom2_serNum": 4255, "donAcc_type": "acceptable", "distance": 3.018, "atom1_id": "///A/511/O", "atom2_id": "///A/514/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 550, "atom1_serNum": 4231, "atom2_serNum": 4257, "donAcc_type": "standard", "distance": 3.029, "atom1_id": "///A/511/O", "atom2_id": "///A/515/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 551, "atom1_serNum": 4240, "atom2_serNum": 4262, "donAcc_type": "standard", "distance": 2.960, "atom1_id": "///A/512/O", "atom2_id": "///A/516/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 552, "atom1_serNum": 4246, "atom2_serNum": 4276, "donAcc_type": "standard", "distance": 2.903, "atom1_id": "///A/513/O", "atom2_id": "///A/517/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 553, "atom1_serNum": 4253, "atom2_serNum": 4280, "donAcc_type": "standard", "distance": 2.989, "atom1_id": "///A/514/O", "atom2_id": "///A/518/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 554, "atom1_serNum": 4255, "atom2_serNum": 4289, "donAcc_type": "acceptable", "distance": 3.299, "atom1_id": "///A/514/OG1", "atom2_id": "///A/518/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 555, "atom1_serNum": 4260, "atom2_serNum": 4291, "donAcc_type": "standard", "distance": 3.089, "atom1_id": "///A/515/O", "atom2_id": "///A/519/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 556, "atom1_serNum": 4265, "atom2_serNum": 4300, "donAcc_type": "standard", "distance": 2.924, "atom1_id": "///A/516/O", "atom2_id": "///A/520/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 557, "atom1_serNum": 4270, "atom2_serNum": 6834, "donAcc_type": "acceptable", "distance": 3.326, "atom1_id": "///A/516/NE1", "atom2_id": "///A/804/O1", "atom_pair": "N:O", "residue_pair": "aa:ligand" }, { "index": 558, "atom1_serNum": 4279, "atom2_serNum": 4312, "donAcc_type": "standard", "distance": 2.911, "atom1_id": "///A/517/O", "atom2_id": "///A/521/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 559, "atom1_serNum": 4283, "atom2_serNum": 4320, "donAcc_type": "standard", "distance": 2.978, "atom1_id": "///A/518/O", "atom2_id": "///A/522/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 560, "atom1_serNum": 4283, "atom2_serNum": 4325, "donAcc_type": "acceptable", "distance": 2.790, "atom1_id": "///A/518/O", "atom2_id": "///A/522/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 561, "atom1_serNum": 4294, "atom2_serNum": 4327, "donAcc_type": "standard", "distance": 3.012, "atom1_id": "///A/519/O", "atom2_id": "///A/523/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 562, "atom1_serNum": 4299, "atom2_serNum": 6834, "donAcc_type": "acceptable", "distance": 2.575, "atom1_id": "///A/519/OE2", "atom2_id": "///A/804/O1", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 563, "atom1_serNum": 4303, "atom2_serNum": 4335, "donAcc_type": "standard", "distance": 3.224, "atom1_id": "///A/520/O", "atom2_id": "///A/524/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 564, "atom1_serNum": 4315, "atom2_serNum": 4340, "donAcc_type": "acceptable", "distance": 2.935, "atom1_id": "///A/521/O", "atom2_id": "///A/524/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 565, "atom1_serNum": 4315, "atom2_serNum": 4342, "donAcc_type": "standard", "distance": 3.155, "atom1_id": "///A/521/O", "atom2_id": "///A/525/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 566, "atom1_serNum": 4323, "atom2_serNum": 4350, "donAcc_type": "standard", "distance": 3.188, "atom1_id": "///A/522/O", "atom2_id": "///A/526/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 567, "atom1_serNum": 4330, "atom2_serNum": 4359, "donAcc_type": "standard", "distance": 2.934, "atom1_id": "///A/523/O", "atom2_id": "///A/527/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 568, "atom1_serNum": 4338, "atom2_serNum": 4368, "donAcc_type": "standard", "distance": 2.975, "atom1_id": "///A/524/O", "atom2_id": "///A/528/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 569, "atom1_serNum": 4345, "atom2_serNum": 4376, "donAcc_type": "standard", "distance": 3.192, "atom1_id": "///A/525/O", "atom2_id": "///A/529/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 570, "atom1_serNum": 4353, "atom2_serNum": 4385, "donAcc_type": "standard", "distance": 3.017, "atom1_id": "///A/526/O", "atom2_id": "///A/530/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 571, "atom1_serNum": 4358, "atom2_serNum": 4393, "donAcc_type": "standard", "distance": 3.301, "atom1_id": "///A/526/NZ", "atom2_id": "///A/530/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 572, "atom1_serNum": 4362, "atom2_serNum": 4394, "donAcc_type": "standard", "distance": 2.906, "atom1_id": "///A/527/O", "atom2_id": "///A/531/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 573, "atom1_serNum": 4366, "atom2_serNum": 4402, "donAcc_type": "standard", "distance": 3.647, "atom1_id": "///A/527/OE1", "atom2_id": "///A/531/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 574, "atom1_serNum": 4367, "atom2_serNum": 4681, "donAcc_type": "acceptable", "distance": 2.448, "atom1_id": "///A/527/OE2", "atom2_id": "///A/566/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 575, "atom1_serNum": 4371, "atom2_serNum": 4419, "donAcc_type": "standard", "distance": 3.024, "atom1_id": "///A/528/O", "atom2_id": "///A/534/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 576, "atom1_serNum": 4384, "atom2_serNum": 4439, "donAcc_type": "standard", "distance": 2.851, "atom1_id": "///A/529/OE2", "atom2_id": "///A/536/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 577, "atom1_serNum": 4392, "atom2_serNum": 4402, "donAcc_type": "standard", "distance": 3.706, "atom1_id": "///A/530/OE1", "atom2_id": "///A/531/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 578, "atom1_serNum": 4430, "atom2_serNum": 4529, "donAcc_type": "standard", "distance": 2.702, "atom1_id": "///A/535/N", "atom2_id": "///A/547/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 579, "atom1_serNum": 4433, "atom2_serNum": 4446, "donAcc_type": "standard", "distance": 3.354, "atom1_id": "///A/535/O", "atom2_id": "///A/537/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 580, "atom1_serNum": 4433, "atom2_serNum": 4526, "donAcc_type": "standard", "distance": 3.160, "atom1_id": "///A/535/O", "atom2_id": "///A/547/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 581, "atom1_serNum": 4446, "atom2_serNum": 4513, "donAcc_type": "standard", "distance": 2.797, "atom1_id": "///A/537/N", "atom2_id": "///A/545/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 582, "atom1_serNum": 4454, "atom2_serNum": 4513, "donAcc_type": "standard", "distance": 3.559, "atom1_id": "///A/538/N", "atom2_id": "///A/545/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 583, "atom1_serNum": 4457, "atom2_serNum": 4510, "donAcc_type": "standard", "distance": 2.787, "atom1_id": "///A/538/O", "atom2_id": "///A/545/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 584, "atom1_serNum": 4465, "atom2_serNum": 4479, "donAcc_type": "acceptable", "distance": 3.378, "atom1_id": "///A/538/OH", "atom2_id": "///A/540/OD2", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 585, "atom1_serNum": 4465, "atom2_serNum": 4887, "donAcc_type": "acceptable", "distance": 3.081, "atom1_id": "///A/538/OH", "atom2_id": "///A/592/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 586, "atom1_serNum": 4465, "atom2_serNum": 6467, "donAcc_type": "acceptable", "distance": 3.263, "atom1_id": "///A/538/OH", "atom2_id": "///P/13/OP1", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 587, "atom1_serNum": 4469, "atom2_serNum": 6854, "donAcc_type": "acceptable", "distance": 2.853, "atom1_id": "///A/539/O", "atom2_id": "///A/806/O2", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 588, "atom1_serNum": 4471, "atom2_serNum": 4498, "donAcc_type": "acceptable", "distance": 3.285, "atom1_id": "///A/539/OG", "atom2_id": "///A/543/O", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 589, "atom1_serNum": 4472, "atom2_serNum": 4498, "donAcc_type": "standard", "distance": 3.162, "atom1_id": "///A/540/N", "atom2_id": "///A/543/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 590, "atom1_serNum": 4475, "atom2_serNum": 4487, "donAcc_type": "standard", "distance": 2.734, "atom1_id": "///A/540/O", "atom2_id": "///A/542/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 591, "atom1_serNum": 4478, "atom2_serNum": 4485, "donAcc_type": "acceptable", "distance": 2.897, "atom1_id": "///A/540/OD1", "atom2_id": "///A/541/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 592, "atom1_serNum": 4478, "atom2_serNum": 4895, "donAcc_type": "standard", "distance": 3.280, "atom1_id": "///A/540/OD1", "atom2_id": "///A/592/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 593, "atom1_serNum": 4479, "atom2_serNum": 4895, "donAcc_type": "standard", "distance": 2.794, "atom1_id": "///A/540/OD2", "atom2_id": "///A/592/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 594, "atom1_serNum": 4480, "atom2_serNum": 6856, "donAcc_type": "acceptable", "distance": 2.886, "atom1_id": "///A/541/N", "atom2_id": "///A/807/O1", "atom_pair": "N:O", "residue_pair": "aa:ligand" }, { "index": 595, "atom1_serNum": 4493, "atom2_serNum": 6848, "donAcc_type": "acceptable", "distance": 3.414, "atom1_id": "///A/542/OD1", "atom2_id": "///A/805/O1S", "atom_pair": "O:O", "residue_pair": "aa:ligand" }, { "index": 596, "atom1_serNum": 4536, "atom2_serNum": 4548, "donAcc_type": "standard", "distance": 3.073, "atom1_id": "///A/548/O", "atom2_id": "///A/550/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 597, "atom1_serNum": 4536, "atom2_serNum": 4552, "donAcc_type": "standard", "distance": 2.931, "atom1_id": "///A/548/O", "atom2_id": "///A/551/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 598, "atom1_serNum": 4560, "atom2_serNum": 4586, "donAcc_type": "standard", "distance": 3.342, "atom1_id": "///A/552/O", "atom2_id": "///A/556/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 599, "atom1_serNum": 4563, "atom2_serNum": 4570, "donAcc_type": "standard", "distance": 3.041, "atom1_id": "///A/552/OD1", "atom2_id": "///A/554/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 600, "atom1_serNum": 4573, "atom2_serNum": 4593, "donAcc_type": "standard", "distance": 2.356, "atom1_id": "///A/554/O", "atom2_id": "///A/557/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 601, "atom1_serNum": 4573, "atom2_serNum": 4602, "donAcc_type": "standard", "distance": 3.245, "atom1_id": "///A/554/O", "atom2_id": "///A/558/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 602, "atom1_serNum": 4578, "atom2_serNum": 4602, "donAcc_type": "standard", "distance": 3.079, "atom1_id": "///A/554/OE2", "atom2_id": "///A/558/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 603, "atom1_serNum": 4582, "atom2_serNum": 4611, "donAcc_type": "standard", "distance": 3.110, "atom1_id": "///A/555/O", "atom2_id": "///A/559/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 604, "atom1_serNum": 4589, "atom2_serNum": 4620, "donAcc_type": "standard", "distance": 2.968, "atom1_id": "///A/556/O", "atom2_id": "///A/560/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 605, "atom1_serNum": 4596, "atom2_serNum": 4625, "donAcc_type": "standard", "distance": 2.975, "atom1_id": "///A/557/O", "atom2_id": "///A/561/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 606, "atom1_serNum": 4601, "atom2_serNum": 4952, "donAcc_type": "standard", "distance": 3.381, "atom1_id": "///A/557/NZ", "atom2_id": "///A/599/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 607, "atom1_serNum": 4601, "atom2_serNum": 4953, "donAcc_type": "standard", "distance": 3.019, "atom1_id": "///A/557/NZ", "atom2_id": "///A/599/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 608, "atom1_serNum": 4605, "atom2_serNum": 4625, "donAcc_type": "standard", "distance": 2.832, "atom1_id": "///A/558/O", "atom2_id": "///A/561/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 609, "atom1_serNum": 4605, "atom2_serNum": 4633, "donAcc_type": "standard", "distance": 2.839, "atom1_id": "///A/558/O", "atom2_id": "///A/562/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 610, "atom1_serNum": 4610, "atom2_serNum": 4641, "donAcc_type": "standard", "distance": 2.476, "atom1_id": "///A/558/NZ", "atom2_id": "///A/562/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 611, "atom1_serNum": 4614, "atom2_serNum": 4642, "donAcc_type": "standard", "distance": 3.002, "atom1_id": "///A/559/O", "atom2_id": "///A/563/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 612, "atom1_serNum": 4619, "atom2_serNum": 4641, "donAcc_type": "standard", "distance": 2.708, "atom1_id": "///A/559/NZ", "atom2_id": "///A/562/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 613, "atom1_serNum": 4623, "atom2_serNum": 4653, "donAcc_type": "standard", "distance": 3.016, "atom1_id": "///A/560/O", "atom2_id": "///A/564/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 614, "atom1_serNum": 4628, "atom2_serNum": 4661, "donAcc_type": "standard", "distance": 3.297, "atom1_id": "///A/561/O", "atom2_id": "///A/565/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 615, "atom1_serNum": 4636, "atom2_serNum": 4670, "donAcc_type": "standard", "distance": 3.052, "atom1_id": "///A/562/O", "atom2_id": "///A/566/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 616, "atom1_serNum": 4645, "atom2_serNum": 4682, "donAcc_type": "standard", "distance": 2.738, "atom1_id": "///A/563/O", "atom2_id": "///A/567/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 617, "atom1_serNum": 4656, "atom2_serNum": 4690, "donAcc_type": "standard", "distance": 3.083, "atom1_id": "///A/564/O", "atom2_id": "///A/568/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 618, "atom1_serNum": 4673, "atom2_serNum": 4703, "donAcc_type": "standard", "distance": 3.516, "atom1_id": "///A/566/O", "atom2_id": "///A/570/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 619, "atom1_serNum": 4685, "atom2_serNum": 4703, "donAcc_type": "standard", "distance": 3.043, "atom1_id": "///A/567/O", "atom2_id": "///A/570/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 620, "atom1_serNum": 4685, "atom2_serNum": 4712, "donAcc_type": "standard", "distance": 2.949, "atom1_id": "///A/567/O", "atom2_id": "///A/571/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 621, "atom1_serNum": 4696, "atom2_serNum": 4753, "donAcc_type": "standard", "distance": 2.762, "atom1_id": "///A/568/OD1", "atom2_id": "///A/577/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 622, "atom1_serNum": 4697, "atom2_serNum": 4756, "donAcc_type": "standard", "distance": 2.944, "atom1_id": "///A/568/ND2", "atom2_id": "///A/577/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 623, "atom1_serNum": 4723, "atom2_serNum": 4736, "donAcc_type": "standard", "distance": 3.224, "atom1_id": "///A/572/O", "atom2_id": "///A/575/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 624, "atom1_serNum": 4764, "atom2_serNum": 4782, "donAcc_type": "standard", "distance": 3.231, "atom1_id": "///A/578/O", "atom2_id": "///A/580/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 625, "atom1_serNum": 4789, "atom2_serNum": 4817, "donAcc_type": "acceptable", "distance": 2.631, "atom1_id": "///A/580/OE1", "atom2_id": "///A/583/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 626, "atom1_serNum": 4818, "atom2_serNum": 4932, "donAcc_type": "standard", "distance": 3.074, "atom1_id": "///A/584/N", "atom2_id": "///A/597/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 627, "atom1_serNum": 4830, "atom2_serNum": 4929, "donAcc_type": "standard", "distance": 3.091, "atom1_id": "///A/585/O", "atom2_id": "///A/597/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 628, "atom1_serNum": 4836, "atom2_serNum": 5207, "donAcc_type": "standard", "distance": 2.899, "atom1_id": "///A/585/NH1", "atom2_id": "///A/631/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 629, "atom1_serNum": 4842, "atom2_serNum": 4920, "donAcc_type": "standard", "distance": 2.842, "atom1_id": "///A/587/N", "atom2_id": "///A/595/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 630, "atom1_serNum": 4845, "atom2_serNum": 4917, "donAcc_type": "standard", "distance": 2.923, "atom1_id": "///A/587/O", "atom2_id": "///A/595/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 631, "atom1_serNum": 4864, "atom2_serNum": 4899, "donAcc_type": "standard", "distance": 3.036, "atom1_id": "///A/589/N", "atom2_id": "///A/593/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 632, "atom1_serNum": 4871, "atom2_serNum": 4899, "donAcc_type": "standard", "distance": 3.300, "atom1_id": "///A/590/N", "atom2_id": "///A/593/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 633, "atom1_serNum": 4874, "atom2_serNum": 4896, "donAcc_type": "standard", "distance": 3.340, "atom1_id": "///A/590/O", "atom2_id": "///A/593/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 634, "atom1_serNum": 4874, "atom2_serNum": 4899, "donAcc_type": "questionable", "distance": 3.134, "atom1_id": "///A/590/O", "atom2_id": "///A/593/O", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 635, "atom1_serNum": 4895, "atom2_serNum": 6460, "donAcc_type": "standard", "distance": 2.700, "atom1_id": "///A/592/NZ", "atom2_id": "///P/12/O2", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 636, "atom1_serNum": 4895, "atom2_serNum": 6570, "donAcc_type": "questionable", "distance": 3.175, "atom1_id": "///A/592/NZ", "atom2_id": "///T/5/N2", "atom_pair": "N:N", "residue_pair": "aa:nt" }, { "index": 637, "atom1_serNum": 4904, "atom2_serNum": 6656, "donAcc_type": "standard", "distance": 3.153, "atom1_id": "///A/593/NZ", "atom2_id": "///T/9/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 638, "atom1_serNum": 4905, "atom2_serNum": 5001, "donAcc_type": "standard", "distance": 2.937, "atom1_id": "///A/594/N", "atom2_id": "///A/606/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 639, "atom1_serNum": 4908, "atom2_serNum": 4998, "donAcc_type": "standard", "distance": 2.852, "atom1_id": "///A/594/O", "atom2_id": "///A/606/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 640, "atom1_serNum": 4916, "atom2_serNum": 6468, "donAcc_type": "acceptable", "distance": 3.030, "atom1_id": "///A/594/OH", "atom2_id": "///P/13/OP2", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 641, "atom1_serNum": 4922, "atom2_serNum": 4987, "donAcc_type": "standard", "distance": 2.878, "atom1_id": "///A/596/N", "atom2_id": "///A/604/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 642, "atom1_serNum": 4925, "atom2_serNum": 4984, "donAcc_type": "standard", "distance": 2.902, "atom1_id": "///A/596/O", "atom2_id": "///A/604/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 643, "atom1_serNum": 4937, "atom2_serNum": 4970, "donAcc_type": "standard", "distance": 3.124, "atom1_id": "///A/598/N", "atom2_id": "///A/602/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 644, "atom1_serNum": 4940, "atom2_serNum": 4963, "donAcc_type": "standard", "distance": 3.251, "atom1_id": "///A/598/O", "atom2_id": "///A/601/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 645, "atom1_serNum": 4943, "atom2_serNum": 4963, "donAcc_type": "standard", "distance": 2.971, "atom1_id": "///A/598/OD1", "atom2_id": "///A/601/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 646, "atom1_serNum": 4943, "atom2_serNum": 4967, "donAcc_type": "standard", "distance": 2.878, "atom1_id": "///A/598/OD1", "atom2_id": "///A/602/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 647, "atom1_serNum": 4994, "atom2_serNum": 5007, "donAcc_type": "standard", "distance": 3.193, "atom1_id": "///A/605/O", "atom2_id": "///A/606/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 648, "atom1_serNum": 5001, "atom2_serNum": 5013, "donAcc_type": "standard", "distance": 2.833, "atom1_id": "///A/606/O", "atom2_id": "///A/608/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 649, "atom1_serNum": 5005, "atom2_serNum": 6468, "donAcc_type": "standard", "distance": 3.816, "atom1_id": "///A/606/NE", "atom2_id": "///P/13/OP2", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 650, "atom1_serNum": 5009, "atom2_serNum": 6448, "donAcc_type": "standard", "distance": 3.048, "atom1_id": "///A/607/N", "atom2_id": "///P/12/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 651, "atom1_serNum": 5016, "atom2_serNum": 5038, "donAcc_type": "standard", "distance": 3.096, "atom1_id": "///A/608/O", "atom2_id": "///A/611/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 652, "atom1_serNum": 5021, "atom2_serNum": 5028, "donAcc_type": "standard", "distance": 2.546, "atom1_id": "///A/609/N", "atom2_id": "///A/609/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 653, "atom1_serNum": 5021, "atom2_serNum": 5149, "donAcc_type": "standard", "distance": 3.307, "atom1_id": "///A/609/N", "atom2_id": "///A/623/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 654, "atom1_serNum": 5024, "atom2_serNum": 5045, "donAcc_type": "standard", "distance": 3.227, "atom1_id": "///A/609/O", "atom2_id": "///A/612/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 655, "atom1_serNum": 5028, "atom2_serNum": 5150, "donAcc_type": "standard", "distance": 2.996, "atom1_id": "///A/609/OE1", "atom2_id": "///A/623/NE2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 656, "atom1_serNum": 5029, "atom2_serNum": 6106, "donAcc_type": "standard", "distance": 3.257, "atom1_id": "///A/609/OE2", "atom2_id": "///A/743/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 657, "atom1_serNum": 5030, "atom2_serNum": 5149, "donAcc_type": "standard", "distance": 3.285, "atom1_id": "///A/610/N", "atom2_id": "///A/623/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 658, "atom1_serNum": 5041, "atom2_serNum": 6427, "donAcc_type": "questionable", "distance": 2.949, "atom1_id": "///A/611/O", "atom2_id": "///P/11/OP1", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 659, "atom1_serNum": 5048, "atom2_serNum": 5075, "donAcc_type": "standard", "distance": 3.905, "atom1_id": "///A/612/O", "atom2_id": "///A/615/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 660, "atom1_serNum": 5048, "atom2_serNum": 5125, "donAcc_type": "standard", "distance": 2.984, "atom1_id": "///A/612/O", "atom2_id": "///A/620/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 661, "atom1_serNum": 5052, "atom2_serNum": 5073, "donAcc_type": "standard", "distance": 3.279, "atom1_id": "///A/612/NE", "atom2_id": "///A/614/OD1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 662, "atom1_serNum": 5054, "atom2_serNum": 6420, "donAcc_type": "standard", "distance": 3.136, "atom1_id": "///A/612/NH1", "atom2_id": "///P/10/O2", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 663, "atom1_serNum": 5054, "atom2_serNum": 6432, "donAcc_type": "standard", "distance": 3.025, "atom1_id": "///A/612/NH1", "atom2_id": "///P/11/O4'", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 664, "atom1_serNum": 5055, "atom2_serNum": 5074, "donAcc_type": "standard", "distance": 3.012, "atom1_id": "///A/612/NH2", "atom2_id": "///A/614/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 665, "atom1_serNum": 5055, "atom2_serNum": 6413, "donAcc_type": "standard", "distance": 2.845, "atom1_id": "///A/612/NH2", "atom2_id": "///P/10/O4'", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 666, "atom1_serNum": 5056, "atom2_serNum": 6427, "donAcc_type": "standard", "distance": 3.703, "atom1_id": "///A/613/N", "atom2_id": "///P/11/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 667, "atom1_serNum": 5059, "atom2_serNum": 5463, "donAcc_type": "questionable", "distance": 3.227, "atom1_id": "///A/613/O", "atom2_id": "///A/663/O", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 668, "atom1_serNum": 5066, "atom2_serNum": 6410, "donAcc_type": "standard", "distance": 3.933, "atom1_id": "///A/613/NH2", "atom2_id": "///P/10/O5'", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 669, "atom1_serNum": 5078, "atom2_serNum": 5125, "donAcc_type": "standard", "distance": 3.664, "atom1_id": "///A/615/O", "atom2_id": "///A/620/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 670, "atom1_serNum": 5089, "atom2_serNum": 6054, "donAcc_type": "standard", "distance": 3.018, "atom1_id": "///A/616/N", "atom2_id": "///A/736/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 671, "atom1_serNum": 5092, "atom2_serNum": 5117, "donAcc_type": "standard", "distance": 3.012, "atom1_id": "///A/616/O", "atom2_id": "///A/620/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 672, "atom1_serNum": 5094, "atom2_serNum": 6054, "donAcc_type": "acceptable", "distance": 2.723, "atom1_id": "///A/616/OG", "atom2_id": "///A/736/OE1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 673, "atom1_serNum": 5095, "atom2_serNum": 5431, "donAcc_type": "standard", "distance": 2.925, "atom1_id": "///A/617/N", "atom2_id": "///A/659/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 674, "atom1_serNum": 5098, "atom2_serNum": 5126, "donAcc_type": "standard", "distance": 2.663, "atom1_id": "///A/617/O", "atom2_id": "///A/621/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 675, "atom1_serNum": 5104, "atom2_serNum": 5431, "donAcc_type": "standard", "distance": 2.948, "atom1_id": "///A/618/N", "atom2_id": "///A/659/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 676, "atom1_serNum": 5107, "atom2_serNum": 5135, "donAcc_type": "standard", "distance": 3.157, "atom1_id": "///A/618/O", "atom2_id": "///A/622/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 677, "atom1_serNum": 5107, "atom2_serNum": 5140, "donAcc_type": "acceptable", "distance": 2.361, "atom1_id": "///A/618/O", "atom2_id": "///A/622/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 678, "atom1_serNum": 5115, "atom2_serNum": 5142, "donAcc_type": "standard", "distance": 3.024, "atom1_id": "///A/619/O", "atom2_id": "///A/623/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 679, "atom1_serNum": 5120, "atom2_serNum": 5151, "donAcc_type": "standard", "distance": 2.958, "atom1_id": "///A/620/O", "atom2_id": "///A/624/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 680, "atom1_serNum": 5129, "atom2_serNum": 5156, "donAcc_type": "standard", "distance": 3.235, "atom1_id": "///A/621/O", "atom2_id": "///A/625/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 681, "atom1_serNum": 5133, "atom2_serNum": 5436, "donAcc_type": "standard", "distance": 3.205, "atom1_id": "///A/621/OE1", "atom2_id": "///A/659/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 682, "atom1_serNum": 5134, "atom2_serNum": 5436, "donAcc_type": "standard", "distance": 3.097, "atom1_id": "///A/621/OE2", "atom2_id": "///A/659/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 683, "atom1_serNum": 5138, "atom2_serNum": 5167, "donAcc_type": "standard", "distance": 3.060, "atom1_id": "///A/622/O", "atom2_id": "///A/626/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 684, "atom1_serNum": 5145, "atom2_serNum": 5174, "donAcc_type": "standard", "distance": 3.016, "atom1_id": "///A/623/O", "atom2_id": "///A/627/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 685, "atom1_serNum": 5150, "atom2_serNum": 6081, "donAcc_type": "standard", "distance": 2.780, "atom1_id": "///A/623/NE2", "atom2_id": "///A/740/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 686, "atom1_serNum": 5154, "atom2_serNum": 5182, "donAcc_type": "standard", "distance": 2.864, "atom1_id": "///A/624/O", "atom2_id": "///A/628/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 687, "atom1_serNum": 5159, "atom2_serNum": 5191, "donAcc_type": "standard", "distance": 3.125, "atom1_id": "///A/625/O", "atom2_id": "///A/629/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 688, "atom1_serNum": 5170, "atom2_serNum": 5196, "donAcc_type": "standard", "distance": 3.086, "atom1_id": "///A/626/O", "atom2_id": "///A/630/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 689, "atom1_serNum": 5177, "atom2_serNum": 5204, "donAcc_type": "standard", "distance": 2.691, "atom1_id": "///A/627/O", "atom2_id": "///A/631/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 690, "atom1_serNum": 5185, "atom2_serNum": 5212, "donAcc_type": "standard", "distance": 3.148, "atom1_id": "///A/628/O", "atom2_id": "///A/632/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 691, "atom1_serNum": 5194, "atom2_serNum": 5229, "donAcc_type": "standard", "distance": 3.294, "atom1_id": "///A/629/O", "atom2_id": "///A/634/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 692, "atom1_serNum": 5194, "atom2_serNum": 5233, "donAcc_type": "standard", "distance": 2.860, "atom1_id": "///A/629/O", "atom2_id": "///A/635/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 693, "atom1_serNum": 5199, "atom2_serNum": 5229, "donAcc_type": "standard", "distance": 2.997, "atom1_id": "///A/630/O", "atom2_id": "///A/634/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 694, "atom1_serNum": 5236, "atom2_serNum": 5266, "donAcc_type": "standard", "distance": 2.900, "atom1_id": "///A/635/O", "atom2_id": "///A/639/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 695, "atom1_serNum": 5239, "atom2_serNum": 5255, "donAcc_type": "questionable", "distance": 2.703, "atom1_id": "///A/635/OD1", "atom2_id": "///A/637/OE1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 696, "atom1_serNum": 5244, "atom2_serNum": 5271, "donAcc_type": "standard", "distance": 3.054, "atom1_id": "///A/636/O", "atom2_id": "///A/640/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 697, "atom1_serNum": 5248, "atom2_serNum": 5255, "donAcc_type": "standard", "distance": 2.661, "atom1_id": "///A/637/N", "atom2_id": "///A/637/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 698, "atom1_serNum": 5251, "atom2_serNum": 5278, "donAcc_type": "standard", "distance": 3.220, "atom1_id": "///A/637/O", "atom2_id": "///A/641/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 699, "atom1_serNum": 5260, "atom2_serNum": 5289, "donAcc_type": "standard", "distance": 2.868, "atom1_id": "///A/638/O", "atom2_id": "///A/642/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 700, "atom1_serNum": 5269, "atom2_serNum": 5297, "donAcc_type": "standard", "distance": 3.391, "atom1_id": "///A/639/O", "atom2_id": "///A/643/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 701, "atom1_serNum": 5274, "atom2_serNum": 5304, "donAcc_type": "standard", "distance": 3.115, "atom1_id": "///A/640/O", "atom2_id": "///A/644/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 702, "atom1_serNum": 5292, "atom2_serNum": 5322, "donAcc_type": "standard", "distance": 3.093, "atom1_id": "///A/642/O", "atom2_id": "///A/646/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 703, "atom1_serNum": 5300, "atom2_serNum": 5329, "donAcc_type": "standard", "distance": 2.978, "atom1_id": "///A/643/O", "atom2_id": "///A/647/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 704, "atom1_serNum": 5300, "atom2_serNum": 5334, "donAcc_type": "acceptable", "distance": 3.072, "atom1_id": "///A/643/O", "atom2_id": "///A/647/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 705, "atom1_serNum": 5307, "atom2_serNum": 5334, "donAcc_type": "acceptable", "distance": 2.852, "atom1_id": "///A/644/O", "atom2_id": "///A/647/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 706, "atom1_serNum": 5307, "atom2_serNum": 5336, "donAcc_type": "standard", "distance": 3.203, "atom1_id": "///A/644/O", "atom2_id": "///A/648/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 707, "atom1_serNum": 5312, "atom2_serNum": 6217, "donAcc_type": "standard", "distance": 2.456, "atom1_id": "///A/644/NZ", "atom2_id": "///A/756/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 708, "atom1_serNum": 5316, "atom2_serNum": 5345, "donAcc_type": "standard", "distance": 2.888, "atom1_id": "///A/645/O", "atom2_id": "///A/649/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 709, "atom1_serNum": 5325, "atom2_serNum": 5354, "donAcc_type": "standard", "distance": 2.754, "atom1_id": "///A/646/O", "atom2_id": "///A/650/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 710, "atom1_serNum": 5332, "atom2_serNum": 5362, "donAcc_type": "standard", "distance": 2.756, "atom1_id": "///A/647/O", "atom2_id": "///A/651/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 711, "atom1_serNum": 5334, "atom2_serNum": 6209, "donAcc_type": "acceptable", "distance": 3.402, "atom1_id": "///A/647/OG1", "atom2_id": "///A/755/O", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 712, "atom1_serNum": 5339, "atom2_serNum": 5367, "donAcc_type": "acceptable", "distance": 2.862, "atom1_id": "///A/648/O", "atom2_id": "///A/651/OG", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 713, "atom1_serNum": 5339, "atom2_serNum": 5368, "donAcc_type": "standard", "distance": 3.114, "atom1_id": "///A/648/O", "atom2_id": "///A/652/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 714, "atom1_serNum": 5348, "atom2_serNum": 5389, "donAcc_type": "standard", "distance": 3.023, "atom1_id": "///A/649/O", "atom2_id": "///A/654/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 715, "atom1_serNum": 5357, "atom2_serNum": 5377, "donAcc_type": "standard", "distance": 2.944, "atom1_id": "///A/650/O", "atom2_id": "///A/653/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 716, "atom1_serNum": 5401, "atom2_serNum": 5974, "donAcc_type": "acceptable", "distance": 2.829, "atom1_id": "///A/655/O", "atom2_id": "///A/727/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 717, "atom1_serNum": 5408, "atom2_serNum": 5428, "donAcc_type": "standard", "distance": 3.080, "atom1_id": "///A/656/O", "atom2_id": "///A/659/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 718, "atom1_serNum": 5415, "atom2_serNum": 5437, "donAcc_type": "standard", "distance": 3.090, "atom1_id": "///A/657/O", "atom2_id": "///A/660/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 719, "atom1_serNum": 5422, "atom2_serNum": 5445, "donAcc_type": "standard", "distance": 3.569, "atom1_id": "///A/658/O", "atom2_id": "///A/661/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 720, "atom1_serNum": 5440, "atom2_serNum": 6020, "donAcc_type": "acceptable", "distance": 2.488, "atom1_id": "///A/660/O", "atom2_id": "///A/732/OH", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 721, "atom1_serNum": 5452, "atom2_serNum": 5755, "donAcc_type": "standard", "distance": 2.823, "atom1_id": "///A/662/N", "atom2_id": "///A/701/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 722, "atom1_serNum": 5455, "atom2_serNum": 5752, "donAcc_type": "standard", "distance": 3.055, "atom1_id": "///A/662/O", "atom2_id": "///A/701/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 723, "atom1_serNum": 5466, "atom2_serNum": 5751, "donAcc_type": "acceptable", "distance": 2.835, "atom1_id": "///A/663/ND1", "atom2_id": "///A/700/OG", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 724, "atom1_serNum": 5470, "atom2_serNum": 5741, "donAcc_type": "standard", "distance": 3.180, "atom1_id": "///A/664/N", "atom2_id": "///A/699/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 725, "atom1_serNum": 5473, "atom2_serNum": 5738, "donAcc_type": "standard", "distance": 3.067, "atom1_id": "///A/664/O", "atom2_id": "///A/699/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 726, "atom1_serNum": 5479, "atom2_serNum": 6408, "donAcc_type": "standard", "distance": 2.888, "atom1_id": "///A/665/N", "atom2_id": "///P/10/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 727, "atom1_serNum": 5488, "atom2_serNum": 5727, "donAcc_type": "standard", "distance": 2.735, "atom1_id": "///A/666/N", "atom2_id": "///A/697/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 728, "atom1_serNum": 5491, "atom2_serNum": 5720, "donAcc_type": "standard", "distance": 2.600, "atom1_id": "///A/666/O", "atom2_id": "///A/696/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 729, "atom1_serNum": 5496, "atom2_serNum": 5558, "donAcc_type": "acceptable", "distance": 2.996, "atom1_id": "///A/667/N", "atom2_id": "///A/673/OH", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 730, "atom1_serNum": 5501, "atom2_serNum": 6389, "donAcc_type": "acceptable", "distance": 3.119, "atom1_id": "///A/667/OG1", "atom2_id": "///P/9/OP1", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 731, "atom1_serNum": 5501, "atom2_serNum": 6390, "donAcc_type": "acceptable", "distance": 2.787, "atom1_id": "///A/667/OG1", "atom2_id": "///P/9/OP2", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 732, "atom1_serNum": 5512, "atom2_serNum": 5542, "donAcc_type": "standard", "distance": 3.866, "atom1_id": "///A/668/NH1", "atom2_id": "///A/672/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 733, "atom1_serNum": 5512, "atom2_serNum": 6368, "donAcc_type": "standard", "distance": 2.736, "atom1_id": "///A/668/NH1", "atom2_id": "///P/8/OP2", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 734, "atom1_serNum": 5513, "atom2_serNum": 6390, "donAcc_type": "standard", "distance": 3.147, "atom1_id": "///A/668/NH2", "atom2_id": "///P/9/OP2", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 735, "atom1_serNum": 5517, "atom2_serNum": 5539, "donAcc_type": "standard", "distance": 2.825, "atom1_id": "///A/669/O", "atom2_id": "///A/672/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 736, "atom1_serNum": 5520, "atom2_serNum": 5522, "donAcc_type": "standard", "distance": 2.859, "atom1_id": "///A/669/OD1", "atom2_id": "///A/670/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 737, "atom1_serNum": 5521, "atom2_serNum": 5538, "donAcc_type": "standard", "distance": 2.364, "atom1_id": "///A/669/OD2", "atom2_id": "///A/671/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 738, "atom1_serNum": 5525, "atom2_serNum": 5547, "donAcc_type": "standard", "distance": 3.430, "atom1_id": "///A/670/O", "atom2_id": "///A/673/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 739, "atom1_serNum": 5558, "atom2_serNum": 6389, "donAcc_type": "acceptable", "distance": 2.398, "atom1_id": "///A/673/OH", "atom2_id": "///P/9/OP1", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 740, "atom1_serNum": 5559, "atom2_serNum": 6367, "donAcc_type": "standard", "distance": 2.817, "atom1_id": "///A/674/N", "atom2_id": "///P/8/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 741, "atom1_serNum": 5568, "atom2_serNum": 6367, "donAcc_type": "standard", "distance": 2.765, "atom1_id": "///A/675/N", "atom2_id": "///P/8/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 742, "atom1_serNum": 5583, "atom2_serNum": 5608, "donAcc_type": "standard", "distance": 2.825, "atom1_id": "///A/677/O", "atom2_id": "///A/681/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 743, "atom1_serNum": 5587, "atom2_serNum": 5613, "donAcc_type": "standard", "distance": 3.343, "atom1_id": "///A/678/O", "atom2_id": "///A/682/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 744, "atom1_serNum": 5594, "atom2_serNum": 5620, "donAcc_type": "standard", "distance": 3.295, "atom1_id": "///A/679/O", "atom2_id": "///A/683/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 745, "atom1_serNum": 5604, "atom2_serNum": 5625, "donAcc_type": "standard", "distance": 2.991, "atom1_id": "///A/680/O", "atom2_id": "///A/684/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 746, "atom1_serNum": 5611, "atom2_serNum": 5634, "donAcc_type": "standard", "distance": 3.054, "atom1_id": "///A/681/O", "atom2_id": "///A/685/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 747, "atom1_serNum": 5616, "atom2_serNum": 5645, "donAcc_type": "standard", "distance": 2.638, "atom1_id": "///A/682/O", "atom2_id": "///A/686/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 748, "atom1_serNum": 5623, "atom2_serNum": 5653, "donAcc_type": "standard", "distance": 2.872, "atom1_id": "///A/683/O", "atom2_id": "///A/687/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 749, "atom1_serNum": 5637, "atom2_serNum": 5670, "donAcc_type": "standard", "distance": 3.688, "atom1_id": "///A/685/O", "atom2_id": "///A/689/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 750, "atom1_serNum": 5643, "atom2_serNum": 5832, "donAcc_type": "standard", "distance": 2.751, "atom1_id": "///A/685/NH1", "atom2_id": "///A/711/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 751, "atom1_serNum": 5644, "atom2_serNum": 5832, "donAcc_type": "standard", "distance": 2.906, "atom1_id": "///A/685/NH2", "atom2_id": "///A/711/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 752, "atom1_serNum": 5644, "atom2_serNum": 5855, "donAcc_type": "standard", "distance": 2.802, "atom1_id": "///A/685/NH2", "atom2_id": "///A/714/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 753, "atom1_serNum": 5648, "atom2_serNum": 5663, "donAcc_type": "standard", "distance": 2.787, "atom1_id": "///A/686/O", "atom2_id": "///A/689/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 754, "atom1_serNum": 5648, "atom2_serNum": 5674, "donAcc_type": "standard", "distance": 3.356, "atom1_id": "///A/686/O", "atom2_id": "///A/690/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 755, "atom1_serNum": 5672, "atom2_serNum": 5899, "donAcc_type": "standard", "distance": 2.623, "atom1_id": "///A/689/NH1", "atom2_id": "///A/719/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 756, "atom1_serNum": 5673, "atom2_serNum": 5899, "donAcc_type": "standard", "distance": 2.879, "atom1_id": "///A/689/NH2", "atom2_id": "///A/719/OE2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 757, "atom1_serNum": 5681, "atom2_serNum": 5694, "donAcc_type": "standard", "distance": 2.942, "atom1_id": "///A/691/O", "atom2_id": "///A/693/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 758, "atom1_serNum": 5702, "atom2_serNum": 5729, "donAcc_type": "acceptable", "distance": 3.115, "atom1_id": "///A/694/N", "atom2_id": "///A/697/OG1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 759, "atom1_serNum": 5705, "atom2_serNum": 5724, "donAcc_type": "standard", "distance": 2.860, "atom1_id": "///A/694/O", "atom2_id": "///A/697/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 760, "atom1_serNum": 5705, "atom2_serNum": 5729, "donAcc_type": "acceptable", "distance": 2.966, "atom1_id": "///A/694/O", "atom2_id": "///A/697/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 761, "atom1_serNum": 5749, "atom2_serNum": 5872, "donAcc_type": "standard", "distance": 2.867, "atom1_id": "///A/700/O", "atom2_id": "///A/717/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 762, "atom1_serNum": 5764, "atom2_serNum": 5860, "donAcc_type": "standard", "distance": 2.846, "atom1_id": "///A/702/N", "atom2_id": "///A/715/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 763, "atom1_serNum": 5767, "atom2_serNum": 5857, "donAcc_type": "standard", "distance": 3.116, "atom1_id": "///A/702/O", "atom2_id": "///A/715/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 764, "atom1_serNum": 5772, "atom2_serNum": 6020, "donAcc_type": "acceptable", "distance": 3.032, "atom1_id": "///A/703/N", "atom2_id": "///A/732/OH", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 765, "atom1_serNum": 5775, "atom2_serNum": 5975, "donAcc_type": "standard", "distance": 2.915, "atom1_id": "///A/703/O", "atom2_id": "///A/728/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 766, "atom1_serNum": 5779, "atom2_serNum": 5844, "donAcc_type": "standard", "distance": 3.094, "atom1_id": "///A/704/N", "atom2_id": "///A/713/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 767, "atom1_serNum": 5782, "atom2_serNum": 5796, "donAcc_type": "standard", "distance": 3.299, "atom1_id": "///A/704/O", "atom2_id": "///A/706/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 768, "atom1_serNum": 5782, "atom2_serNum": 5850, "donAcc_type": "standard", "distance": 3.391, "atom1_id": "///A/704/O", "atom2_id": "///A/713/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 769, "atom1_serNum": 5787, "atom2_serNum": 5955, "donAcc_type": "standard", "distance": 2.842, "atom1_id": "///A/705/N", "atom2_id": "///A/726/O", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 770, "atom1_serNum": 5796, "atom2_serNum": 5982, "donAcc_type": "standard", "distance": 3.354, "atom1_id": "///A/706/N", "atom2_id": "///A/728/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 771, "atom1_serNum": 5813, "atom2_serNum": 5833, "donAcc_type": "standard", "distance": 3.143, "atom1_id": "///A/709/O", "atom2_id": "///A/712/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 772, "atom1_serNum": 5817, "atom2_serNum": 5840, "donAcc_type": "standard", "distance": 3.157, "atom1_id": "///A/709/NE", "atom2_id": "///A/712/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 773, "atom1_serNum": 5819, "atom2_serNum": 6736, "donAcc_type": "standard", "distance": 2.568, "atom1_id": "///A/709/NH1", "atom2_id": "///T/13/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 774, "atom1_serNum": 5820, "atom2_serNum": 6736, "donAcc_type": "standard", "distance": 3.123, "atom1_id": "///A/709/NH2", "atom2_id": "///T/13/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 775, "atom1_serNum": 5821, "atom2_serNum": 6717, "donAcc_type": "standard", "distance": 2.977, "atom1_id": "///A/710/N", "atom2_id": "///T/12/OP2", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 776, "atom1_serNum": 5824, "atom2_serNum": 5841, "donAcc_type": "standard", "distance": 3.012, "atom1_id": "///A/710/O", "atom2_id": "///A/713/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 777, "atom1_serNum": 5824, "atom2_serNum": 5852, "donAcc_type": "standard", "distance": 2.944, "atom1_id": "///A/710/O", "atom2_id": "///A/714/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 778, "atom1_serNum": 5829, "atom2_serNum": 6716, "donAcc_type": "standard", "distance": 3.050, "atom1_id": "///A/711/N", "atom2_id": "///T/12/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 779, "atom1_serNum": 5850, "atom2_serNum": 5982, "donAcc_type": "standard", "distance": 2.304, "atom1_id": "///A/713/NH1", "atom2_id": "///A/728/OD2", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 780, "atom1_serNum": 5868, "atom2_serNum": 5891, "donAcc_type": "standard", "distance": 2.983, "atom1_id": "///A/716/O", "atom2_id": "///A/719/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 781, "atom1_serNum": 5911, "atom2_serNum": 5948, "donAcc_type": "acceptable", "distance": 2.918, "atom1_id": "///A/721/N", "atom2_id": "///A/725/ND1", "atom_pair": "N:N", "residue_pair": "aa:aa" }, { "index": 782, "atom1_serNum": 5914, "atom2_serNum": 5933, "donAcc_type": "standard", "distance": 2.679, "atom1_id": "///A/721/O", "atom2_id": "///A/724/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 783, "atom1_serNum": 5914, "atom2_serNum": 5942, "donAcc_type": "standard", "distance": 2.727, "atom1_id": "///A/721/O", "atom2_id": "///A/725/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 784, "atom1_serNum": 5914, "atom2_serNum": 5948, "donAcc_type": "acceptable", "distance": 3.203, "atom1_id": "///A/721/O", "atom2_id": "///A/725/ND1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 785, "atom1_serNum": 5917, "atom2_serNum": 5926, "donAcc_type": "standard", "distance": 3.373, "atom1_id": "///A/721/OD1", "atom2_id": "///A/723/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 786, "atom1_serNum": 5917, "atom2_serNum": 5931, "donAcc_type": "acceptable", "distance": 2.802, "atom1_id": "///A/721/OD1", "atom2_id": "///A/723/OG1", "atom_pair": "O:O", "residue_pair": "aa:aa" }, { "index": 787, "atom1_serNum": 5931, "atom2_serNum": 5941, "donAcc_type": "acceptable", "distance": 2.628, "atom1_id": "///A/723/OG1", "atom2_id": "///A/724/NZ", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 788, "atom1_serNum": 5966, "atom2_serNum": 5983, "donAcc_type": "standard", "distance": 3.041, "atom1_id": "///A/727/O", "atom2_id": "///A/729/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 789, "atom1_serNum": 5978, "atom2_serNum": 6009, "donAcc_type": "standard", "distance": 3.219, "atom1_id": "///A/728/O", "atom2_id": "///A/732/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 790, "atom1_serNum": 5981, "atom2_serNum": 5988, "donAcc_type": "standard", "distance": 3.238, "atom1_id": "///A/728/OD1", "atom2_id": "///A/730/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 791, "atom1_serNum": 5981, "atom2_serNum": 5997, "donAcc_type": "standard", "distance": 2.680, "atom1_id": "///A/728/OD1", "atom2_id": "///A/731/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 792, "atom1_serNum": 5986, "atom2_serNum": 6021, "donAcc_type": "standard", "distance": 2.932, "atom1_id": "///A/729/O", "atom2_id": "///A/733/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 793, "atom1_serNum": 5991, "atom2_serNum": 6029, "donAcc_type": "standard", "distance": 2.782, "atom1_id": "///A/730/O", "atom2_id": "///A/734/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 794, "atom1_serNum": 6000, "atom2_serNum": 6038, "donAcc_type": "standard", "distance": 2.907, "atom1_id": "///A/731/O", "atom2_id": "///A/735/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 795, "atom1_serNum": 6000, "atom2_serNum": 6047, "donAcc_type": "standard", "distance": 3.535, "atom1_id": "///A/731/O", "atom2_id": "///A/736/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 796, "atom1_serNum": 6008, "atom2_serNum": 6694, "donAcc_type": "acceptable", "distance": 3.278, "atom1_id": "///A/731/OH", "atom2_id": "///T/11/OP1", "atom_pair": "O:O", "residue_pair": "aa:nt" }, { "index": 797, "atom1_serNum": 6012, "atom2_serNum": 6056, "donAcc_type": "standard", "distance": 3.112, "atom1_id": "///A/732/O", "atom2_id": "///A/737/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 798, "atom1_serNum": 6024, "atom2_serNum": 6063, "donAcc_type": "standard", "distance": 2.987, "atom1_id": "///A/733/O", "atom2_id": "///A/738/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 799, "atom1_serNum": 6059, "atom2_serNum": 6083, "donAcc_type": "standard", "distance": 3.136, "atom1_id": "///A/737/O", "atom2_id": "///A/741/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 800, "atom1_serNum": 6066, "atom2_serNum": 6090, "donAcc_type": "standard", "distance": 2.811, "atom1_id": "///A/738/O", "atom2_id": "///A/742/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 801, "atom1_serNum": 6074, "atom2_serNum": 6108, "donAcc_type": "standard", "distance": 2.524, "atom1_id": "///A/739/O", "atom2_id": "///A/743/NH1", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 802, "atom1_serNum": 6086, "atom2_serNum": 6118, "donAcc_type": "standard", "distance": 3.053, "atom1_id": "///A/741/O", "atom2_id": "///A/745/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 803, "atom1_serNum": 6093, "atom2_serNum": 6126, "donAcc_type": "standard", "distance": 2.941, "atom1_id": "///A/742/O", "atom2_id": "///A/746/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 804, "atom1_serNum": 6097, "atom2_serNum": 6136, "donAcc_type": "standard", "distance": 2.655, "atom1_id": "///A/742/OE1", "atom2_id": "///A/746/NH2", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 805, "atom1_serNum": 6098, "atom2_serNum": 6133, "donAcc_type": "standard", "distance": 3.172, "atom1_id": "///A/742/OE2", "atom2_id": "///A/746/NE", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 806, "atom1_serNum": 6109, "atom2_serNum": 6663, "donAcc_type": "standard", "distance": 2.801, "atom1_id": "///A/743/NH2", "atom2_id": "///T/9/O3'", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 807, "atom1_serNum": 6109, "atom2_serNum": 6675, "donAcc_type": "standard", "distance": 2.656, "atom1_id": "///A/743/NH2", "atom2_id": "///T/10/OP1", "atom_pair": "N:O", "residue_pair": "aa:nt" }, { "index": 808, "atom1_serNum": 6113, "atom2_serNum": 6137, "donAcc_type": "standard", "distance": 3.311, "atom1_id": "///A/744/O", "atom2_id": "///A/747/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 809, "atom1_serNum": 6121, "atom2_serNum": 6142, "donAcc_type": "standard", "distance": 3.286, "atom1_id": "///A/745/O", "atom2_id": "///A/748/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 810, "atom1_serNum": 6121, "atom2_serNum": 6157, "donAcc_type": "standard", "distance": 3.350, "atom1_id": "///A/745/O", "atom2_id": "///A/750/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 811, "atom1_serNum": 6129, "atom2_serNum": 6153, "donAcc_type": "standard", "distance": 3.166, "atom1_id": "///A/746/O", "atom2_id": "///A/749/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 812, "atom1_serNum": 6172, "atom2_serNum": 6198, "donAcc_type": "standard", "distance": 2.589, "atom1_id": "///A/751/O", "atom2_id": "///A/754/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 813, "atom1_serNum": 6172, "atom2_serNum": 6206, "donAcc_type": "standard", "distance": 3.540, "atom1_id": "///A/751/O", "atom2_id": "///A/755/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 814, "atom1_serNum": 6183, "atom2_serNum": 6206, "donAcc_type": "standard", "distance": 3.054, "atom1_id": "///A/752/O", "atom2_id": "///A/755/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 815, "atom1_serNum": 6183, "atom2_serNum": 6214, "donAcc_type": "standard", "distance": 3.188, "atom1_id": "///A/752/O", "atom2_id": "///A/756/N", "atom_pair": "O:N", "residue_pair": "aa:aa" }, { "index": 816, "atom1_serNum": 6189, "atom2_serNum": 6196, "donAcc_type": "standard", "distance": 2.185, "atom1_id": "///A/753/N", "atom2_id": "///A/753/OE1", "atom_pair": "N:O", "residue_pair": "aa:aa" }, { "index": 817, "atom1_serNum": 6239, "atom2_serNum": 6815, "donAcc_type": "standard", "distance": 2.709, "atom1_id": "///P/1/O6", "atom2_id": "///T/16/N4", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 818, "atom1_serNum": 6240, "atom2_serNum": 6813, "donAcc_type": "standard", "distance": 2.755, "atom1_id": "///P/1/N1", "atom2_id": "///T/16/N3", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 819, "atom1_serNum": 6242, "atom2_serNum": 6812, "donAcc_type": "standard", "distance": 2.685, "atom1_id": "///P/1/N2", "atom2_id": "///T/16/O2", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 820, "atom1_serNum": 6261, "atom2_serNum": 6773, "donAcc_type": "standard", "distance": 2.868, "atom1_id": "///P/2/N6", "atom2_id": "///T/14/O6", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 821, "atom1_serNum": 6261, "atom2_serNum": 6795, "donAcc_type": "standard", "distance": 3.350, "atom1_id": "///P/2/N6", "atom2_id": "///T/15/O4", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 822, "atom1_serNum": 6262, "atom2_serNum": 6793, "donAcc_type": "standard", "distance": 3.054, "atom1_id": "///P/2/N1", "atom2_id": "///T/15/N3", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 823, "atom1_serNum": 6279, "atom2_serNum": 6776, "donAcc_type": "standard", "distance": 2.944, "atom1_id": "///P/3/O2", "atom2_id": "///T/14/N2", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 824, "atom1_serNum": 6280, "atom2_serNum": 6774, "donAcc_type": "standard", "distance": 2.916, "atom1_id": "///P/3/N3", "atom2_id": "///T/14/N1", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 825, "atom1_serNum": 6282, "atom2_serNum": 6751, "donAcc_type": "standard", "distance": 3.109, "atom1_id": "///P/3/N4", "atom2_id": "///T/13/O6", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 826, "atom1_serNum": 6282, "atom2_serNum": 6773, "donAcc_type": "standard", "distance": 2.840, "atom1_id": "///P/3/N4", "atom2_id": "///T/14/O6", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 827, "atom1_serNum": 6298, "atom2_serNum": 6754, "donAcc_type": "standard", "distance": 2.724, "atom1_id": "///P/4/O2", "atom2_id": "///T/13/N2", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 828, "atom1_serNum": 6299, "atom2_serNum": 6752, "donAcc_type": "standard", "distance": 2.741, "atom1_id": "///P/4/N3", "atom2_id": "///T/13/N1", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 829, "atom1_serNum": 6301, "atom2_serNum": 6751, "donAcc_type": "standard", "distance": 2.729, "atom1_id": "///P/4/N4", "atom2_id": "///T/13/O6", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 830, "atom1_serNum": 6320, "atom2_serNum": 6731, "donAcc_type": "standard", "distance": 3.185, "atom1_id": "///P/5/N6", "atom2_id": "///T/12/O4", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 831, "atom1_serNum": 6321, "atom2_serNum": 6729, "donAcc_type": "standard", "distance": 2.973, "atom1_id": "///P/5/N1", "atom2_id": "///T/12/N3", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 832, "atom1_serNum": 6338, "atom2_serNum": 6712, "donAcc_type": "standard", "distance": 3.143, "atom1_id": "///P/6/O2", "atom2_id": "///T/11/N2", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 833, "atom1_serNum": 6339, "atom2_serNum": 6710, "donAcc_type": "standard", "distance": 3.437, "atom1_id": "///P/6/N3", "atom2_id": "///T/11/N1", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 834, "atom1_serNum": 6360, "atom2_serNum": 6690, "donAcc_type": "standard", "distance": 3.149, "atom1_id": "///P/7/O6", "atom2_id": "///T/10/N4", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 835, "atom1_serNum": 6361, "atom2_serNum": 6688, "donAcc_type": "standard", "distance": 3.012, "atom1_id": "///P/7/N1", "atom2_id": "///T/10/N3", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 836, "atom1_serNum": 6363, "atom2_serNum": 6687, "donAcc_type": "standard", "distance": 2.776, "atom1_id": "///P/7/N2", "atom2_id": "///T/10/O2", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 837, "atom1_serNum": 6382, "atom2_serNum": 6671, "donAcc_type": "standard", "distance": 3.189, "atom1_id": "///P/8/O6", "atom2_id": "///T/9/N4", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 838, "atom1_serNum": 6383, "atom2_serNum": 6669, "donAcc_type": "standard", "distance": 2.876, "atom1_id": "///P/8/N1", "atom2_id": "///T/9/N3", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 839, "atom1_serNum": 6385, "atom2_serNum": 6668, "donAcc_type": "standard", "distance": 2.520, "atom1_id": "///P/8/N2", "atom2_id": "///T/9/O2", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 840, "atom1_serNum": 6385, "atom2_serNum": 6669, "donAcc_type": "standard", "distance": 2.869, "atom1_id": "///P/8/N2", "atom2_id": "///T/9/N3", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 841, "atom1_serNum": 6401, "atom2_serNum": 6652, "donAcc_type": "standard", "distance": 2.871, "atom1_id": "///P/9/O2", "atom2_id": "///T/8/N2", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 842, "atom1_serNum": 6402, "atom2_serNum": 6650, "donAcc_type": "standard", "distance": 2.964, "atom1_id": "///P/9/N3", "atom2_id": "///T/8/N1", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 843, "atom1_serNum": 6404, "atom2_serNum": 6627, "donAcc_type": "standard", "distance": 3.232, "atom1_id": "///P/9/N4", "atom2_id": "///T/7/O6", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 844, "atom1_serNum": 6404, "atom2_serNum": 6649, "donAcc_type": "standard", "distance": 2.972, "atom1_id": "///P/9/N4", "atom2_id": "///T/8/O6", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 845, "atom1_serNum": 6420, "atom2_serNum": 6630, "donAcc_type": "standard", "distance": 2.611, "atom1_id": "///P/10/O2", "atom2_id": "///T/7/N2", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 846, "atom1_serNum": 6421, "atom2_serNum": 6628, "donAcc_type": "standard", "distance": 3.000, "atom1_id": "///P/10/N3", "atom2_id": "///T/7/N1", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 847, "atom1_serNum": 6423, "atom2_serNum": 6627, "donAcc_type": "standard", "distance": 3.310, "atom1_id": "///P/10/N4", "atom2_id": "///T/7/O6", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 848, "atom1_serNum": 6442, "atom2_serNum": 6607, "donAcc_type": "standard", "distance": 3.000, "atom1_id": "///P/11/N6", "atom2_id": "///T/6/O4", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 849, "atom1_serNum": 6443, "atom2_serNum": 6605, "donAcc_type": "standard", "distance": 2.608, "atom1_id": "///P/11/N1", "atom2_id": "///T/6/N3", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 850, "atom1_serNum": 6460, "atom2_serNum": 6570, "donAcc_type": "standard", "distance": 2.646, "atom1_id": "///P/12/O2", "atom2_id": "///T/5/N2", "atom_pair": "O:N", "residue_pair": "nt:nt" }, { "index": 851, "atom1_serNum": 6461, "atom2_serNum": 6568, "donAcc_type": "standard", "distance": 2.582, "atom1_id": "///P/12/N3", "atom2_id": "///T/5/N1", "atom_pair": "N:N", "residue_pair": "nt:nt" }, { "index": 852, "atom1_serNum": 6463, "atom2_serNum": 6575, "donAcc_type": "standard", "distance": 2.723, "atom1_id": "///P/12/N4", "atom2_id": "///T/5/O6", "atom_pair": "N:O", "residue_pair": "nt:nt" }, { "index": 853, "atom1_serNum": 6624, "atom2_serNum": 6863, "donAcc_type": "acceptable", "distance": 2.685, "atom1_id": "///T/7/N7", "atom2_id": "///T/101/O1", "atom_pair": "N:O", "residue_pair": "nt:ligand" }, { "index": 854, "atom1_serNum": 6627, "atom2_serNum": 6865, "donAcc_type": "acceptable", "distance": 2.922, "atom1_id": "///T/7/O6", "atom2_id": "///T/101/O2", "atom_pair": "O:O", "residue_pair": "nt:ligand" }, { "index": 855, "atom1_serNum": 6834, "atom2_serNum": 6838, "donAcc_type": "acceptable", "distance": 2.558, "atom1_id": "///A/804/O1", "atom2_id": "///A/804/O3", "atom_pair": "O:O", "residue_pair": "ligand:ligand" } ], "refCoords": { "purine": [ " 12 ATOMS, 12 BONDS", " 1 N -2.2500 5.0000 0.4000", " 2 N -2.2500 -0.5000 0.4000", " 3 N -2.2500 -0.5000 -0.4000", " 4 N -2.2500 5.0000 -0.4000", " 5 C 1.2500 5.0000 0.4000", " 6 C 1.2500 -0.5000 0.4000", " 7 C 1.2500 -0.5000 -0.4000", " 8 C 1.2500 5.0000 -0.4000", " 9 C -2.2500 5.0000 0.4000", " 10 C -2.2500 -0.5000 0.4000", " 11 C -2.2500 -0.5000 -0.4000", " 12 C -2.2500 5.0000 -0.4000", " 1 1 2", " 2 2 3", " 3 3 4", " 4 4 1", " 5 5 6", " 6 6 7", " 7 7 8", " 8 5 8", " 9 9 5", " 10 10 6", " 11 11 7", " 12 12 8" ], "pyrimidine": [ " 12 ATOMS, 12 BONDS", " 1 N -2.2500 5.0000 0.4000", " 2 N -2.2500 1.0000 0.4000", " 3 N -2.2500 1.0000 -0.4000", " 4 N -2.2500 5.0000 -0.4000", " 5 C 1.2500 5.0000 0.4000", " 6 C 1.2500 1.0000 0.4000", " 7 C 1.2500 1.0000 -0.4000", " 8 C 1.2500 5.0000 -0.4000", " 9 C -2.2500 5.0000 0.4000", " 10 C -2.2500 1.0000 0.4000", " 11 C -2.2500 1.0000 -0.4000", " 12 C -2.2500 5.0000 -0.4000", " 1 1 2", " 2 2 3", " 3 3 4", " 4 4 1", " 5 5 6", " 6 6 7", " 7 7 8", " 8 5 8", " 9 9 5", " 10 10 6", " 11 11 7", " 12 12 8" ], "wc_pair": [ " 12 ATOMS, 12 BONDS", " 1 N -2.2500 5.0000 0.4000", " 2 N -2.2500 -5.0000 0.4000", " 3 N -2.2500 -5.0000 -0.4000", " 4 N -2.2500 5.0000 -0.4000", " 5 C 2.2500 5.0000 0.4000", " 6 C 2.2500 -5.0000 0.4000", " 7 C 2.2500 -5.0000 -0.4000", " 8 C 2.2500 5.0000 -0.4000", " 9 C -2.2500 5.0000 0.4000", " 10 C -2.2500 -5.0000 0.4000", " 11 C -2.2500 -5.0000 -0.4000", " 12 C -2.2500 5.0000 -0.4000", " 1 1 2", " 2 2 3", " 3 3 4", " 4 4 1", " 5 5 6", " 6 6 7", " 7 7 8", " 8 5 8", " 9 9 5", " 10 10 6", " 11 11 7", " 12 12 8" ] }, "metadata": { "license": "http://innovation.columbia.edu/technologies/CU20391", "url": "http://x3dna.org/", "url_alt": "http://home.x3dna.org/", "forum": "http://forum.x3dna.org/", "citation": "Lu et al. (2015). 'DSSR: an integrated software tool for dissecting the spatial structure of RNA.' Nucleic Acids Res., 43(21):e142 [doi:10.1093/nar/gkv716].", "str_id": "9ig7", "num_aaChains": 1, "aaChains": "A=756", "num_naChains": 2, "naChains": "P=13,T=16", "num_atoms": 6979, "num_waters": 140, "num_metals": 2, "metals_desc": "Mg=1,Mn=1", "num_notes": 52, "notes": [ { "Aminors": "A-minor interactions (including types I and II)" }, { "Cstem_index": "stem index of the 'Canonical' helix in k-turn" }, { "Cstem_pair": "Cstem bp delineating the k-turn internal loop" }, { "Dp": "perpendicular distance of the 3' P atom to the glycosidic bond" }, { "GA_pair": "sheared G-A pair in k-turn" }, { "HtypePknot": "H-type pseudoknot" }, { "Kturn": "kink-turn (k-turn)" }, { "LW": "Leontis-Westhof" }, { "NCstem_index": "stem index of the 'Non-Canonical' helix in k-turn" }, { "NCstem_pair": "NCstem bp delineating the k-turn internal loop" }, { "Uturn": "U-turn of the UNR- or GNRA-type" }, { "aa": "amino acid" }, { "atom_pair": "symbols of the two atoms involved in an H-bond" }, { "auxfiles": "auxiliary files" }, { "glyco_bond": "conformation of base related to sugar (syn or anti)" }, { "bb_type": "backbone conformation, BI or BII" }, { "bending_angle": "angle between two helical axes" }, { "bp": "base pair" }, { "bseq": "base sequence in one-letter code" }, { "bulge": "bulge loop" }, { "coaxStacks": "coaxial stacking of stems within a helix" }, { "dbn": "dot bracket notation" }, { "desc": "description" }, { "donAcc_type": "donor/acceptor type of the atom pair in an H-bond" }, { "epsilon_zeta": "difference between epsilon and zeta torsion angles" }, { "hairpin": "hairpin loop" }, { "hbond": "hydrogen bond (H-bond)" }, { "helix": "defined by base-stacking interactions, regardless of bp type and backbone connectivity" }, { "id": "identifier" }, { "iloop": "internal loop" }, { "index": "serial number" }, { "isoCanonPairs": "isolated canonical pairs" }, { "junction": "(multi-branched) junction loop" }, { "kissingLoop": "kissing loop" }, { "multiplet": "3+ bases in a coplanar geometry" }, { "na": "nucleic acid" }, { "nonPair": "two nts not forming a pair, but with H-bonding/stacking interactions" }, { "nonStack": "nucleotide not involved in stacking interactions" }, { "nt": "nucleotide" }, { "num": "number" }, { "oArea": "overlap areas between two bases, including exocyclic atoms" }, { "oArea_ring": "overlap areas between two bases, including only ring atoms" }, { "phosContacts": "H-bonding and atom-capping interactions involving a phosphate" }, { "residue_pair": "types of the two residues involved in an H-bond" }, { "rmsd": "root-mean-squares deviation" }, { "serNum": "serial number" }, { "ssSegments": "single-stranded segments not involved in loops" }, { "ssZp": "Z-coordinate of the 3' phosphorus atom with reference to the 5' base plane" }, { "sstr": "secondary structure in dbn" }, { "stem": "helix consisting of only canonical pairs, with a continuous backbone" }, { "str_id": "structure identifier, derived from inpfile with extension removed" }, { "vert_dist": "vertical distance from an atom to a base plane" } ], "num_auxfiles": 12, "auxfiles": [ { "index": 1, "name": "dssr-pairs.pdb", "desc": "an ensemble of base pairs" }, { "index": 2, "name": "dssr-stems.pdb", "desc": "an ensemble of stems" }, { "index": 3, "name": "dssr-helices.pdb", "desc": "an ensemble of helices (coaxial stacking)" }, { "index": 4, "name": "dssr-2ndstrs.bpseq", "desc": "secondary structure in bpseq format" }, { "index": 5, "name": "dssr-2ndstrs.ct", "desc": "secondary structure in connectivity table format" }, { "index": 6, "name": "dssr-2ndstrs.dbn", "desc": "secondary structure in dot-bracket notation" }, { "index": 7, "name": "dssr-torsions.txt", "desc": "backbone torsion angles and suite names" }, { "index": 8, "name": "dssr-stacks.pdb", "desc": "an ensemble of base stacks" }, { "index": 9, "name": "dssr-rotmat.txt", "desc": "position vector and rotation matrix" }, { "index": 10, "name": "dssr-viewV.pdb", "desc": "vertical view of the principal moment of inertia" }, { "index": 11, "name": "dssr-viewH.pdb", "desc": "horizontal view of the principal moment of inertia" }, { "index": 12, "name": "dssr-viewT.pdb", "desc": "top view of the principal moment of inertia" } ], "time_used": "999" } }